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CmoCh10G003280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G003280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReticulon family protein
Genome locationCmo_Chr10:1482332..1482967
RNA-Seq ExpressionCmoCh10G003280
SyntenyCmoCh10G003280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70242.1 Os01g0133650, partial [Oryza sativa Japonica Group]9.1e-1134.21Show/hide
Query:  HELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAV-AASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLP
        H L S+ E+  + +  E   +  A I   ++V AV  A+P   ++   D+       V     P+   + PVG+      + +  +VVL  V   +   P
Subjt:  HELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAV-AASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLP

Query:  EDGEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE
        E  EV LVGD+L GEG+V+LEPLGALAPL   D       +  P H +  V  +DE           GGEVE+WDA  G++ EPLV  V+
Subjt:  EDGEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE

GER32793.1 reticulon family protein [Striga asiatica]2.4e-1945.22Show/hide
Query:  PAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGI----GGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPLGALAPL
        P   + PQ LE+  +   + EL  VG    PVDP Q  VG+       E  + EG +VVLV V R LA+  E  EV  VGD+L  + +V+ EPLGALAP+
Subjt:  PAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGI----GGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPLGALAPL

Query:  VEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLV
         E +   H+  VAA  HW+WEVVGLDE          DGGEV E DA   ++DEPLV
Subjt:  VEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLV

KAA0058092.1 hypothetical protein E6C27_scaffold274G004000 [Cucumis melo var. makuwa]1.8e-3560.74Show/hide
Query:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL
        M  I  +SI+ A+A +PQSL+Q N DI S E G + AA GPVDPSQGPVG+G  E DSD+G +VVLVHVTR  A   EDGE+ L+GD+LGG+GSV+ EPL
Subjt:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL

Query:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG
        G L PL+E+D GAH   VAA  HW+W+V+GLDE G
Subjt:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG

KAG7023305.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8098.72Show/hide
Query:  ELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPED
        +LRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPED
Subjt:  ELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPED

Query:  GEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG
        GEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE G
Subjt:  GEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG

PKA54109.1 hypothetical protein AXF42_Ash018119 [Apostasia shenzhenica]8.2e-2043.1Show/hide
Query:  EFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLV-HVTRGLAVLPEDGEVFLVGDNLGGEG
        + P KQ A   +  ++ A  A+P  L+Q + D  + +   +GAA GPVDP + PVG  G E D   GG+VVLV       A   EDGE  +VG+++ GE 
Subjt:  EFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLV-HVTRGLAVLPEDGEVFLVGDNLGGEG

Query:  SVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE
        +  LEPLGALAP    +  +H G VAA    +  VV ++E          DGGEVEE DAG GE+DE LV EVE
Subjt:  SVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ5 Uncharacterized protein1.4e-3359.26Show/hide
Query:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL
        M  I  +SI+ AVA  PQ L+Q   DI S E G V AA GP+DPSQGPVG+G  E DS++GGEVVLVHV R  A   EDGE+ LVGD+LGG+GSV+ EPL
Subjt:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL

Query:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG
        G LAPL+E+D   H   VAA  HW+W+V+GL+E G
Subjt:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG

A0A0P0UY67 Os01g0133650 protein (Fragment)4.4e-1134.21Show/hide
Query:  HELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAV-AASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLP
        H L S+ E+  + +  E   +  A I   ++V AV  A+P   ++   D+       V     P+   + PVG+      + +  +VVL  V   +   P
Subjt:  HELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAV-AASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLP

Query:  EDGEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE
        E  EV LVGD+L GEG+V+LEPLGALAPL   D       +  P H +  V  +DE           GGEVE+WDA  G++ EPLV  V+
Subjt:  EDGEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE

A0A2I0AEY0 Uncharacterized protein4.0e-2043.1Show/hide
Query:  EFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLV-HVTRGLAVLPEDGEVFLVGDNLGGEG
        + P KQ A   +  ++ A  A+P  L+Q + D  + +   +GAA GPVDP + PVG  G E D   GG+VVLV       A   EDGE  +VG+++ GE 
Subjt:  EFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLV-HVTRGLAVLPEDGEVFLVGDNLGGEG

Query:  SVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE
        +  LEPLGALAP    +  +H G VAA    +  VV ++E          DGGEVEE DAG GE+DE LV EVE
Subjt:  SVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLVGEVE

A0A5A7PIV6 Reticulon family protein1.2e-1945.22Show/hide
Query:  PAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGI----GGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPLGALAPL
        P   + PQ LE+  +   + EL  VG    PVDP Q  VG+       E  + EG +VVLV V R LA+  E  EV  VGD+L  + +V+ EPLGALAP+
Subjt:  PAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGI----GGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPLGALAPL

Query:  VEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLV
         E +   H+  VAA  HW+WEVVGLDE          DGGEV E DA   ++DEPLV
Subjt:  VEVDCGAHLGFVAAPTHWSWEVVGLDE----------DGGEVEEWDAGFGEKDEPLV

A0A5D3DYP5 Uncharacterized protein8.8e-3660.74Show/hide
Query:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL
        M  I  +SI+ A+A +PQSL+Q N DI S E G + AA GPVDPSQGPVG+G  E DSD+G +VVLVHVTR  A   EDGE+ L+GD+LGG+GSV+ EPL
Subjt:  MAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVLVHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPL

Query:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG
        G L PL+E+D GAH   VAA  HW+W+V+GLDE G
Subjt:  GALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGTATAAGCTCAGAAAATCAAAAGGAATTGGTTTATGCACATAATTTAATGATTAAACTCCATGAGCTTAGGAGCAAACAAGAGGAGCCTATTCAAGGAATTGG
GCATGAATTTCCTGGCAAACAAATGGCATACATTGGTGTCAGCTCCATTGTACCGGCAGTGGCTGCCAGTCCTCAGTCTTTGGAGCAAGCCAACGTTGACATCCATTCTG
TTGAACTTGGTGGGGTGGGCGCCGCCTTTGGACCAGTCGACCCAAGTCAAGGTCCGGTTGGAATTGGTGGTGGAGAAGTGGATTCCGACGAGGGTGGGGAGGTAGTGCTC
GTCCATGTAACAAGAGGGCTTGCAGTGTTGCCGGAAGACGGGGAAGTATTTCTGGTCGGAGACAACTTGGGAGGCGAGGGGTCGGTCAATTTGGAACCACTGGGAGCCCT
TGCGCCATTGGTGGAGGTTGATTGTGGGGCGCATTTGGGGTTTGTAGCGGCCCCGACCCACTGGTCCTGGGAGGTCGTAGGACTCGACGAAGATGGTGGAGAAGTTGAAG
AGTGGGATGCAGGATTCGGAGAGAAGGATGAACCTTTGGTTGGAGAAGTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCGTATAAGCTCAGAAAATCAAAAGGAATTGGTTTATGCACATAATTTAATGATTAAACTCCATGAGCTTAGGAGCAAACAAGAGGAGCCTATTCAAGGAATTGG
GCATGAATTTCCTGGCAAACAAATGGCATACATTGGTGTCAGCTCCATTGTACCGGCAGTGGCTGCCAGTCCTCAGTCTTTGGAGCAAGCCAACGTTGACATCCATTCTG
TTGAACTTGGTGGGGTGGGCGCCGCCTTTGGACCAGTCGACCCAAGTCAAGGTCCGGTTGGAATTGGTGGTGGAGAAGTGGATTCCGACGAGGGTGGGGAGGTAGTGCTC
GTCCATGTAACAAGAGGGCTTGCAGTGTTGCCGGAAGACGGGGAAGTATTTCTGGTCGGAGACAACTTGGGAGGCGAGGGGTCGGTCAATTTGGAACCACTGGGAGCCCT
TGCGCCATTGGTGGAGGTTGATTGTGGGGCGCATTTGGGGTTTGTAGCGGCCCCGACCCACTGGTCCTGGGAGGTCGTAGGACTCGACGAAGATGGTGGAGAAGTTGAAG
AGTGGGATGCAGGATTCGGAGAGAAGGATGAACCTTTGGTTGGAGAAGTCGAGTAG
Protein sequenceShow/hide protein sequence
MNRISSENQKELVYAHNLMIKLHELRSKQEEPIQGIGHEFPGKQMAYIGVSSIVPAVAASPQSLEQANVDIHSVELGGVGAAFGPVDPSQGPVGIGGGEVDSDEGGEVVL
VHVTRGLAVLPEDGEVFLVGDNLGGEGSVNLEPLGALAPLVEVDCGAHLGFVAAPTHWSWEVVGLDEDGGEVEEWDAGFGEKDEPLVGEVE