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CmoCh10G003630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G003630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:1647651..1651524
RNA-Seq ExpressionCmoCh10G003630
SyntenyCmoCh10G003630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021562 - Protein of unknown function DUF3007


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589642.1 hypothetical protein SDJN03_15065, partial [Cucurbita argyrosperma subsp. sororia]1.2e-9188.73Show/hide
Query:  GMAIFTHGCSISRFFCEREGTLSLGIPAASALPQR-------AGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTS
        GMAIF HGCS SRFFCEREGTLSLGI AASALPQR       A VYGHFARET TSRQLSK+EVLDFPRKGFFATRKVVLTVP DSSSSNTSSSKD+PT+
Subjt:  GMAIFTHGCSISRFFCEREGTLSLGIPAASALPQR-------AGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTS

Query:  KPEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTL
        K EQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGL      TYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTL
Subjt:  KPEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTL

Query:  LEQVDEEKSQSTS
        LEQVDEEKS STS
Subjt:  LEQVDEEKSQSTS

XP_004137355.1 uncharacterized protein LOC101203378 [Cucumis sativus]1.9e-8984.29Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FT GCS SR F EREGTL LGI AA  LPQ A VYGHFARE GTSR+LSK+E +DFPRKGFF TRKVVLTVP+DSSSSNTSSS DD T++ EQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLE+AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

XP_008453500.1 PREDICTED: uncharacterized protein LOC103494194 [Cucumis melo]2.5e-8984.29Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FTHGCS  R F EREGTL LGI AA  LPQ A VYG FARE GTSR+LSK+E LDFPRKGFFATRKVVLTVP+DSSSSNTSSS +DPT++ EQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLE+AGYD MQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

XP_022921999.1 uncharacterized protein LOC111430086 [Cucurbita moschata]1.0e-106100Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTS
        SQSTS
Subjt:  SQSTS

XP_038880733.1 uncharacterized protein LOC120072335 [Benincasa hispida]2.2e-9386.19Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FTHGCS SR FCEREGTL LGI AA  LPQRA VYGHFARE GTSR+LSK+E LDFPRKGFFATRKVVLTVPRDSSSSNTS+SK+DPT++ E+TPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLK+GLE+AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

TrEMBL top hitse value%identityAlignment
A0A0A0LPZ9 Uncharacterized protein9.4e-9084.29Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FT GCS SR F EREGTL LGI AA  LPQ A VYGHFARE GTSR+LSK+E +DFPRKGFF TRKVVLTVP+DSSSSNTSSS DD T++ EQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLE+AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

A0A1S3BX71 uncharacterized protein LOC1034941941.2e-8984.29Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FTHGCS  R F EREGTL LGI AA  LPQ A VYG FARE GTSR+LSK+E LDFPRKGFFATRKVVLTVP+DSSSSNTSSS +DPT++ EQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLE+AGYD MQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

A0A6J1E245 uncharacterized protein LOC1114300865.0e-107100Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTS
        SQSTS
Subjt:  SQSTS

A0A6J1EFX7 uncharacterized protein LOC1114330184.4e-8780.48Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FTHG   SR FCEREGTL LG  AA  LPQRA VYGHFARE G+S +LSK+E +DFP KGFF T++VV+TVPRDSSSSNTSSS+DDPT++ +QTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

A0A6J1IDW5 uncharacterized protein LOC1114717521.7e-8680.48Show/hide
Query:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG
        MA+FTHG   SR FCEREGTL LG  AA  LPQRA VY HFARE G+S++LSK+E +DFP KGFF T+KVVLTVPRDSSSSN SSS+DDPT++ +QTPFG
Subjt:  MAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFG

Query:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK
        YTRKDVLLIGLGVTVLGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESLTEAEL+ LLEQV+EEK
Subjt:  YTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEK

Query:  SQSTSDSSLH
        SQS S   ++
Subjt:  SQSTSDSSLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17930.1 unknown protein9.1e-4571.54Show/hide
Query:  SSNTSSSKDDPTSKPEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQK
        SSN++ ++DD  +K + TPFGYTRKDV+LIG+GVT LG GL+SGLE+ G DP+QAGN VQL+LVLGLTLGWISTY+FRV +K+MTYAQQLRDYE +VMQK
Subjt:  SSNTSSSKDDPTSKPEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQK

Query:  RLESLTEAELMTLLEQVDEEKSQ
        RLESL+EAEL  L+ QVDEEK++
Subjt:  RLESLTEAELMTLLEQVDEEKSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTATTCTTCCTCCTGCAACTGTTTTCCGGTTTCTGGTCATAAAACAGCCAATCGGAATGGCTATTTTTACACATGGATGCTCCATTTCCAGATTTTTCTGTGA
AAGGGAGGGGACCTTGTCTTTAGGCATTCCGGCTGCTTCAGCTTTGCCGCAGAGAGCGGGAGTTTACGGACATTTTGCGAGAGAGACAGGAACTAGTCGGCAGTTGTCAA
AAAGGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTAGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGAT
CCTACAAGTAAACCCGAGCAAACACCTTTTGGCTACACGAGGAAGGATGTTTTATTAATTGGTTTGGGTGTCACAGTTCTTGGATTTGGACTGAAAAGTGGATTAGAGTT
TGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATA
TGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAACGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAA
AAGAGCCAATCAACTAGTGATTCTTCTCTCCACCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTATTCTTCCTCCTGCAACTGTTTTCCGGTTTCTGGTCATAAAACAGCCAATCGGAATGGCTATTTTTACACATGGATGCTCCATTTCCAGATTTTTCTGTGA
AAGGGAGGGGACCTTGTCTTTAGGCATTCCGGCTGCTTCAGCTTTGCCGCAGAGAGCGGGAGTTTACGGACATTTTGCGAGAGAGACAGGAACTAGTCGGCAGTTGTCAA
AAAGGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTAGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGAT
CCTACAAGTAAACCCGAGCAAACACCTTTTGGCTACACGAGGAAGGATGTTTTATTAATTGGTTTGGGTGTCACAGTTCTTGGATTTGGACTGAAAAGTGGATTAGAGTT
TGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATA
TGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAACGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAA
AAGAGCCAATCAACTAGTGATTCTTCTCTCCACCGTTAA
Protein sequenceShow/hide protein sequence
MLPILPPATVFRFLVIKQPIGMAIFTHGCSISRFFCEREGTLSLGIPAASALPQRAGVYGHFARETGTSRQLSKREVLDFPRKGFFATRKVVLTVPRDSSSSNTSSSKDD
PTSKPEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEE
KSQSTSDSSLHR