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CmoCh10G003910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G003910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein 230
Genome locationCmo_Chr10:1770878..1771697
RNA-Seq ExpressionCmoCh10G003910
SyntenyCmoCh10G003910
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589675.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4999.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022921334.1 transmembrane protein 230-like [Cucurbita moschata]1.5e-49100Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022987351.1 transmembrane protein 230-like [Cucurbita maxima]2.1e-4898.06Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_023516626.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]3.3e-4999.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIAL+VSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]1.2e-4695.15Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2306.3e-4692.23Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDR HGVFFSLLG LLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2302.2e-4693.2Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDRAHGVFFSLLG LLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1E055 Transmembrane protein 2307.2e-50100Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2301.1e-4592.23Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2301.0e-4898.06Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2309.2e-1045.45Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PG Y+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2305.4e-1045.45Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PG Y+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2305.4e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PG Y+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2309.2e-1045.45Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PG Y+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2309.2e-1045.45Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PG Y+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.8e-4074.76Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+++ + + V+N+PP+KEI+LAV LLVFG +GIV+G FMA NRVGGDR HG+FF +LG LLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)4.2e-1043.24Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PG Y TRIAYY+++G +G+ F+ IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.4e-4278.64Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI++++ + VNN+PP+KEIALAV+LLVFG +GIV G FMA NRVGGDR HG+FF +LG LLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTC
TCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGGGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCAGGGTCCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
CGTAGTCAAAAACAGCCCGAGAGCTTTCTCTTCGCTTCTAAAACTCAAAAGTCCACCGTCGTCTCCTCCGCCGCCGTCTTCCCCAAATCCGATACTCTTTCTCTGCATAT
CGAAGCTTCAACGCCTTCTTCTTTTTCCAGCTCTTGATCTCCGGTATTACAGAGAAAAATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGG
ATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGT
AATCGAGTCGGGGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTCCTACTACACGCGGATTGCCTACTATGCTTACAAGGG
CTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAAATGCTCCAAGTTCCTAACCATTTCTCTACATTTGTACAGATTTTCTTCTCCAGATTTCTTCATTGTCTAC
GTTGATTCCACCTTCCCGTTTCCCTTTGACTACTCATTACTCTGTATCCCTTTGTCGTTGATAGTTCTTCTGTTTCTTAAGGCCTATATGTATATAAATTGTTAATTTCA
GATCACAATCGAGGCATTTATCTATATAATCTGAAATTTCGCTAATTTTTGCATTTGTTTGTTGATTTGAAC
Protein sequenceShow/hide protein sequence
MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIPPV