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CmoCh10G004030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase 36
Genome locationCmo_Chr10:1822974..1825571
RNA-Seq ExpressionCmoCh10G004030
SyntenyCmoCh10G004030
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR018800 - Proline-rich protein PRCC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589687.1 hypothetical protein SDJN03_15110, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7596.08Show/hide
Query:  MLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSY
        MLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVP  ILEVEQEDLIKNRPRQ+QVKLTGIA GPSY
Subjt:  MLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSY

Query:  QPTSTKGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QP STKGKPSKLHKRKHQITSLYYDMKQKE ELTERRARGLQTKAETRGNYGW
Subjt:  QPTSTKGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

KAG7023367.1 hypothetical protein SDJN02_14392, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-7482.35Show/hide
Query:  MMLIPGRTTRMLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVK
        MMLIP RTTRMLQLTI VQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVP  ILEVEQEDLIKNRPRQ+QVK
Subjt:  MMLIPGRTTRMLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVK

Query:  LTGIASGPSYQ-------------------------PTSTKGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYG
        LTGIA GPSYQ                         P STKGKPSKLHKRKHQITSLYYDMKQKE ELTERRARGLQTKAETRGNYG
Subjt:  LTGIASGPSYQ-------------------------PTSTKGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYG

TYK28575.1 ubiquitin carboxyl-terminal hydrolase 36 [Cucumis melo var. makuwa]9.4e-5480.88Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A DY SYES+GNYGD + YGS+P  QP + DTENAVRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

XP_008453553.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cucumis melo]2.1e-5380.15Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A DY SYES+GNYGD + YGS+P  QP + DTEN+VRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

XP_038878727.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120070904 [Benincasa hispida]2.7e-5375Show/hide
Query:  SVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPT-ST
        +V  +   +  A+ A DY SY S+GNYGD + YGSDP  QP MVDT+NAVRIPEKRRRNEVP EILEV+Q++L+KNRPRQDQVKLTGIA GPSYQP  ST
Subjt:  SVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPT-ST

Query:  KGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        KGKPSKLHKRKHQI+SLYYDMKQKE EL ERRARGL TKAET+G YGW
Subjt:  KGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ8 Uncharacterized protein4.2e-5278.68Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A D+  YES+GNYGD + YGS+   QP + DTENAVRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

A0A1S3BWI7 ubiquitin carboxyl-terminal hydrolase 361.0e-5380.15Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A DY SYES+GNYGD + YGS+P  QP + DTEN+VRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

A0A5A7USS5 Ubiquitin carboxyl-terminal hydrolase 361.0e-5380.15Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A DY SYES+GNYGD + YGS+P  QP + DTEN+VRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

A0A5D3DZ12 Ubiquitin carboxyl-terminal hydrolase 364.5e-5480.88Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH
        A+ A DY SYES+GNYGD + YGS+P  QP + DTENAVRIPEKRRRNEVP EI+EV+Q++LIKNRPRQDQVKLTGIA GPSYQP S KGKPSKLHKRKH
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTKGKPSKLHKRKH

Query:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        QITSLYYDMKQKETEL ERRARGL TKAET+G YGW
Subjt:  QITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

A0A6J1C0D7 proline-rich protein PRCC6.5e-5372.79Show/hide
Query:  SVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTK
        +V  +   +  A+   DY  YE++GN+GD I YGSDP  QPAMV+TENAVRIPEKRRRN+VP EI+EV+Q++L+KNRPRQDQVK+TGIA GPSYQP STK
Subjt:  SVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQPTSTK

Query:  GKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        GKPSKLHKRKHQITSLYYDMKQKE EL ERRARGL TKAET+  YGW
Subjt:  GKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19270.1 CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink).1.7e-2954.35Show/hide
Query:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQP--TSTKGKPSKLHKR
        +++  D  SY   GN  +   + +  G   A+V  ++  R   +R RN++ PEI+EV+Q++L+KNRPR DQVK TGIA GP+YQP  +S+KGK SKLHKR
Subjt:  ATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSYQP--TSTKGKPSKLHKR

Query:  KHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW
        KHQIT+L+ DMK KE+ELTERR+RGL TKAET+  YGW
Subjt:  KHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAATCCCGGGGAGAACAACGAGAATGCTGCAACTTACCATTTCGGTGCAGAACAAAATGCATGGAATTATGCAAGCTACGATCGCTAGTGACTATAAAAGTTA
TGAGAGTCATGGTAACTATGGTGATCGCATCCCATACGGGAGTGACCCTGGCTGTCAGCCCGCAATGGTGGACACTGAAAATGCTGTTAGAATACCTGAGAAGAGAAGAA
GGAATGAGGTTCCGCCGGAAATACTTGAGGTGGAGCAGGAGGACTTGATTAAGAATCGACCGAGGCAGGACCAGGTCAAGTTAACTGGAATTGCTTCTGGTCCTTCTTAC
CAGCCTACCTCAACAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCATCAAATCACTTCGTTGTATTATGATATGAAGCAAAAAGAGACAGAATTAACCGAGAGGCG
TGCGAGGGGTCTACAAACAAAGGCTGAAACACGAGGAAACTATGGCTGGAATGGCTCATTAGAACTTTTTGCCACACGACTGACCTTCACTATTTTTCCTTATCTTTTAT
CCTTAGATGGTCGCTTCGTACATCAGGGTGAAACAACAGGAGTTCAGACCATTCCTGAGAAGATGGTGAAAGCTAAAGCTAATCATAACTATCTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAATCCCGGGGAGAACAACGAGAATGCTGCAACTTACCATTTCGGTGCAGAACAAAATGCATGGAATTATGCAAGCTACGATCGCTAGTGACTATAAAAGTTA
TGAGAGTCATGGTAACTATGGTGATCGCATCCCATACGGGAGTGACCCTGGCTGTCAGCCCGCAATGGTGGACACTGAAAATGCTGTTAGAATACCTGAGAAGAGAAGAA
GGAATGAGGTTCCGCCGGAAATACTTGAGGTGGAGCAGGAGGACTTGATTAAGAATCGACCGAGGCAGGACCAGGTCAAGTTAACTGGAATTGCTTCTGGTCCTTCTTAC
CAGCCTACCTCAACAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCATCAAATCACTTCGTTGTATTATGATATGAAGCAAAAAGAGACAGAATTAACCGAGAGGCG
TGCGAGGGGTCTACAAACAAAGGCTGAAACACGAGGAAACTATGGCTGGAATGGCTCATTAGAACTTTTTGCCACACGACTGACCTTCACTATTTTTCCTTATCTTTTAT
CCTTAGATGGTCGCTTCGTACATCAGGGTGAAACAACAGGAGTTCAGACCATTCCTGAGAAGATGGTGAAAGCTAAAGCTAATCATAACTATCTCAAGTAG
Protein sequenceShow/hide protein sequence
MMLIPGRTTRMLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPPEILEVEQEDLIKNRPRQDQVKLTGIASGPSY
QPTSTKGKPSKLHKRKHQITSLYYDMKQKETELTERRARGLQTKAETRGNYGWNGSLELFATRLTFTIFPYLLSLDGRFVHQGETTGVQTIPEKMVKAKANHNYLK