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CmoCh10G004040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionubiquitin carboxyl-terminal hydrolase 36
Genome locationCmo_Chr10:1825593..1826007
RNA-Seq ExpressionCmoCh10G004040
SyntenyCmoCh10G004040
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587730.1 hypothetical protein SDJN03_16295, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1061.45Show/hide
Query:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG GD +LTES SM  + +P P S         PS      K+VV+FKPPVNSSLLKL ED++DDDD EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

KAG6589688.1 hypothetical protein SDJN03_15111, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4683.21Show/hide
Query:  MDGTGDGDLTESVSM-------NLNQIPHPRS--PSQ----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSSTTLKMHGIRQRWELFRV
        MDG GDGDLTESVSM       N  ++  P+S  PS     KKVVVFKPPVNSSLLKLDEDEEDDDD+EEEEEIRRRKASQSSTTLKMHGIRQRWELFRV
Subjt:  MDGTGDGDLTESVSM-------NLNQIPHPRS--PSQ----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSSTTLKMHGIRQRWELFRV

Query:  QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL
        QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL
Subjt:  QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL

KAG7021697.1 hypothetical protein SDJN02_15423, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-1061.45Show/hide
Query:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG GD +LTES SM  + +P P S         PS      K+VV+FKPPVNSSLLKL ED++DDDD EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

KAG7023367.1 hypothetical protein SDJN02_14392, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4582.48Show/hide
Query:  MDGTGDGDLTESVSM-------NLNQIPHPRS--PSQ----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSSTTLKMHGIRQRWELFRV
        MDG GDGDLTESVSM       N  ++  P+S  PS     KKVVVFKPPVNSSLLKLDEDE+DDDD+EEEEEIRRRKASQSSTTLKMHGIRQRWELFRV
Subjt:  MDGTGDGDLTESVSM-------NLNQIPHPRS--PSQ----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSSTTLKMHGIRQRWELFRV

Query:  QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL
        QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL
Subjt:  QALGEDRFSIQMFGYRLLIIRAALKRLITVLKTTTVL

XP_023002268.1 ubiquitin carboxyl-terminal hydrolase 36 [Cucurbita maxima]4.8e-1061.45Show/hide
Query:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG GD +LTES SM  + +P P S         PS      K+VV+FKPPVNSSLLKL ED++DDDD EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ8 Uncharacterized protein3.0e-1060.98Show/hide
Query:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG  DG+LT+SVSM       N  ++  P+S PS      K+VV+FKPPVNSSL+KL E E+DDDD+EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

A0A1S3BWI7 ubiquitin carboxyl-terminal hydrolase 363.0e-1060.98Show/hide
Query:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG  DG+LT+SVSM       N  ++  P+S PS      K+VV+FKPPVNSSL+KL E E+DDDD+EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

A0A5A7USS5 Ubiquitin carboxyl-terminal hydrolase 363.0e-1060.98Show/hide
Query:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG  DG+LT+SVSM       N  ++  P+S PS      K+VV+FKPPVNSSL+KL E E+DDDD+EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

A0A5D3DZ12 Ubiquitin carboxyl-terminal hydrolase 363.0e-1060.98Show/hide
Query:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG  DG+LT+SVSM       N  ++  P+S PS      K+VV+FKPPVNSSL+KL E E+DDDD+EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSM-------NLNQIPHPRS-PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

A0A6J1KT25 ubiquitin carboxyl-terminal hydrolase 362.3e-1061.45Show/hide
Query:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS
        DG GD +LTES SM  + +P P S         PS      K+VV+FKPPVNSSLLKL ED++DDDD EEEEEIRRRKASQSS
Subjt:  DGTGDGDLTESVSMNLNQIPHPRS---------PSQ-----KKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTACCGGTGACGGTGATCTCACGGAATCAGTATCCATGAACCTAAATCAAATCCCTCATCCTCGGAGTCCCAGCCAAAAAAAGGTTGTCGTATTTAAGCCACC
CGTTAACTCTTCTTTGCTGAAATTGGACGAAGACGAGGAGGACGACGACGACAATGAAGAAGAAGAAGAAATAAGGCGCAGAAAGGCATCTCAATCCTCGACAACGTTGA
AAATGCATGGAATTCGACAACGTTGGGAGTTATTTCGAGTTCAGGCTCTCGGCGAAGATCGATTCTCGATACAGATGTTCGGGTATCGTCTTCTGATAATTCGGGCAGCA
CTCAAAAGATTGATCACAGTACTGAAAACTACGACAGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTACCGGTGACGGTGATCTCACGGAATCAGTATCCATGAACCTAAATCAAATCCCTCATCCTCGGAGTCCCAGCCAAAAAAAGGTTGTCGTATTTAAGCCACC
CGTTAACTCTTCTTTGCTGAAATTGGACGAAGACGAGGAGGACGACGACGACAATGAAGAAGAAGAAGAAATAAGGCGCAGAAAGGCATCTCAATCCTCGACAACGTTGA
AAATGCATGGAATTCGACAACGTTGGGAGTTATTTCGAGTTCAGGCTCTCGGCGAAGATCGATTCTCGATACAGATGTTCGGGTATCGTCTTCTGATAATTCGGGCAGCA
CTCAAAAGATTGATCACAGTACTGAAAACTACGACAGTTTTGTAA
Protein sequenceShow/hide protein sequence
MDGTGDGDLTESVSMNLNQIPHPRSPSQKKVVVFKPPVNSSLLKLDEDEEDDDDNEEEEEIRRRKASQSSTTLKMHGIRQRWELFRVQALGEDRFSIQMFGYRLLIIRAA
LKRLITVLKTTTVL