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CmoCh10G004070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:1839259..1839531
RNA-Seq ExpressionCmoCh10G004070
SyntenyCmoCh10G004070
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023370.1 hypothetical protein SDJN02_14395, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4398.89Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNY+AKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
XP_022922030.1 uncharacterized protein LOC111430103 [Cucurbita moschata]1.1e-43100Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
XP_022974229.1 uncharacterized protein LOC111472849 [Cucurbita maxima]1.4e-4091.11Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQF+SEI+GLKVKELP YVKPMLS+DY KKAVQRGLDNYNAKYIQTGSIDPLLHVC+GGMILSYL+ALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
XP_022987225.1 uncharacterized protein LOC111484841 [Cucurbita maxima]5.8e-4296.67Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKP+LSVDYVKKA QRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
XP_023515839.1 uncharacterized protein LOC111779885 [Cucurbita pepo subsp. pepo]2.0e-4297.78Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQT SIDPLLHVCFGGMILSYLLALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
TrEMBL top hitse value%identityAlignment
A0A6J1C4T8 uncharacterized protein LOC1110073931.2e-4088.89Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAM+QF+SEIKGLKVKELP +VKPMLS+DY+KKAV+RGLDNYNAKYIQTGSIDPLLHVCFGGM+ SYL+ALPEERRHLAHQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
A0A6J1E7G2 uncharacterized protein LOC1114301035.2e-44100Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
A0A6J1F109 uncharacterized protein LOC1114411491.3e-3990Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQF+SEI+GLKVKELP YVKPML++D VKKAVQRGLDNYNAKYIQT SIDPLLHVC+GGMILSYLLALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
A0A6J1IH01 uncharacterized protein LOC1114728497.0e-4191.11Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQF+SEI+GLKVKELP YVKPMLS+DY KKAVQRGLDNYNAKYIQTGSIDPLLHVC+GGMILSYL+ALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
A0A6J1JG85 uncharacterized protein LOC1114848412.8e-4296.67Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MAMRQFYSEIKGLKVKELPAYVKP+LSVDYVKKA QRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30010.1 unknown protein5.3e-3368.89Show/hide
Query:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH
        MA+R+ YSEI+G KV ELP Y+K   S++ VK +V+RGLDNYN KYIQT S+DP+LH+CF GM  SYL+ALP ERRHL HQQHAKEHGGH
Subjt:  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGAGGCAATTCTACTCCGAAATTAAGGGTTTGAAAGTTAAGGAGCTGCCGGCGTACGTGAAGCCGATGCTCTCCGTTGATTATGTTAAGAAGGCAGTGCAGAG
AGGTCTTGACAATTATAACGCGAAGTATATTCAGACCGGTTCTATTGACCCTCTGCTCCATGTTTGCTTTGGCGGTATGATCCTTTCCTATCTTTTGGCGCTCCCTGAGG
AACGGCGCCATCTTGCACATCAGCAACACGCCAAAGAGCATGGTGGCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGAGGCAATTCTACTCCGAAATTAAGGGTTTGAAAGTTAAGGAGCTGCCGGCGTACGTGAAGCCGATGCTCTCCGTTGATTATGTTAAGAAGGCAGTGCAGAG
AGGTCTTGACAATTATAACGCGAAGTATATTCAGACCGGTTCTATTGACCCTCTGCTCCATGTTTGCTTTGGCGGTATGATCCTTTCCTATCTTTTGGCGCTCCCTGAGG
AACGGCGCCATCTTGCACATCAGCAACACGCCAAAGAGCATGGTGGCCACTGA
Protein sequenceShow/hide protein sequence
MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCFGGMILSYLLALPEERRHLAHQQHAKEHGGH