; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G004080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCadherin-4 like
Genome locationCmo_Chr10:1840586..1843435
RNA-Seq ExpressionCmoCh10G004080
SyntenyCmoCh10G004080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]1.8e-8288.4Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAPLKL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD+E + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

KAG6589692.1 hypothetical protein SDJN03_15115, partial [Cucurbita argyrosperma subsp. sororia]8.6e-9399.45Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDT+FDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

XP_022922028.1 uncharacterized protein LOC111430102 [Cucurbita moschata]2.9e-93100Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

XP_022987223.1 uncharacterized protein LOC111484840 [Cucurbita maxima]1.4e-9096.69Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSK+QSAPLK+LLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFA+GSISGATRL PVDTEFD SNEVE EIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

XP_023515837.1 uncharacterized protein LOC111779884 [Cucurbita pepo subsp. pepo]5.6e-9298.34Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDK VEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAP+DTEFD SNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

TrEMBL top hitse value%identityAlignment
A0A6J1C135 uncharacterized protein LOC1110073001.0e-7580.11Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARIL+ SQS + SK QS+P +L LLIPSSF LGHRNRSTRSGK KFIEIDLESSSFG DS++LAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCL+FFAK SISG+TRLAPVDTE + +NEVELEI+VK    TDNSNQ E+
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1E5F5 uncharacterized protein LOC1114301021.4e-93100Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X14.3e-8287.85Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAP KL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD+E + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X11.9e-8288.4Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAPLKL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD E + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1JIU5 uncharacterized protein LOC1114848406.6e-9196.69Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSK+QSAPLK+LLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFA+GSISGATRL PVDTEFD SNEVE EIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein1.3e-1939.86Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGS
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KGS
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGS

AT1G16840.3 unknown protein5.1e-1936.9Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KG      +L    TE  +++E   E E
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE

AT1G16840.4 unknown protein5.1e-1936.9Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KG      +L    TE  +++E   E E
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE

AT1G78890.1 unknown protein2.2e-2238.01Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFW
        MAR LS S S    +  +A     LL+PSS  +  R+     RS  +      EID+ +           + KL+D V RI+V RS PDW+PFVPG+SFW
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFW

Query:  VPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE
        VPP R++   +  L +KL  P+S E S S+++ RGWPC D+F KG      +   V+TE  ++     E E
Subjt:  VPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIE

AT2G19180.1 unknown protein8.4e-2240.15Show/hide
Query:  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFF---AKGSISG
        IE++++S +   ++E   ++KL++FV RIIV  STPDW+PF PGSSFWVPP +    K+ +L DK+  PL++E S SL++  GWPC  FF     GS S 
Subjt:  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFF---AKGSISG

Query:  ATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED
            A V+ +   +  +E+++      I   S +PED
Subjt:  ATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAATTTTGTCTCAATCTCAATCTTTCATTTCCTCCAAGATGCAATCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAA
CCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGATTTTGTTG
AGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGGAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGGTCTATATCTGGAGCAACTCG
GCTGGCTCCAGTAGATACCGAGTTCGACGCTTCAAATGAGGTGGAGTTGGAGATCGAGGTGAAGACATCAACAATCACAGATAACTCAAACCAGCCTGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
TAAATACTGCGAAGAGGTCAAGTTCTAATCTGAAATATTTGTCGAACTGAAGGAAAAATTCAGAATACTCATCTTGGAATCTGAAGTTCTTCGCACATCCGTAGCGAAAA
GGTTAGGAAGGAGAGAATTCTTTGATTTGTAGCGTGGGAATTTCATCTGGGTTCTTCGGATGGCTCGAATTTTGTCTCAATCTCAATCTTTCATTTCCTCCAAGATGCAA
TCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATC
GTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGATTTTGTTGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTG
GTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGGAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAAC
TCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGGTCTATATCTGGAGCAACTCGGCTGGCTCCAGTAGATACCGAGTTCGACGCTTCAAATGAGGTGGAGTTGGA
GATCGAGGTGAAGACATCAACAATCACAGATAACTCAAACCAGCCTGAGGATTGAGAAATATGAACCTCATACCTCATTCACTAATGCAGTTGGGATCATTAGATGGTTG
TCAGAGATTCGAGAGACCGAATAGAGTGGAAAGTGACGATGACGACGTGAGGTCGGAGAGAAATGGAATGGCTCTACAGATGGTTCCAGTTCGGAGTTCACTTCCATTTG
CTTCGTCTCGACCCGCCTTGTCTATTTAAATCCCCCCAAACTTATGGTTGTTTATGCTTAGTTGTTTTTGGACCGACCGAGTACTTTAGGATCTCCAAATTCACCAGCTT
GTTATTTAAATGAGGTGAATTCTCAGGTTCTTGTCGTCCCCTCCACCCCTGTCCTATCAAATCTATACACACAGCCACAGTAAGAAATTTTGCTTATGCATGTATAAAAG
TAACTGATAAATTGTTTTACATTTCAAATGCCTGTAAGATCAATCTCAGTTTGTAGTTGCAGTAATTTCCATACTGCATGAAACTTTTGTGCTATAGGTATAAGAAGTTC
TCTTTTATAGGTTTGTGTTGCTGTAACACTGAAGATCTGCCT
Protein sequenceShow/hide protein sequence
MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLF
DKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTEFDASNEVELEIEVKTSTITDNSNQPED