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CmoCh10G004330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger protein 7
Genome locationCmo_Chr10:1978848..1979273
RNA-Seq ExpressionCmoCh10G004330
SyntenyCmoCh10G004330
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589714.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7298.58Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL HHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

XP_022921390.1 zinc finger protein 7 [Cucurbita moschata]4.1e-74100Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

XP_022987492.1 zinc finger protein 7-like [Cucurbita maxima]1.9e-7197.87Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL  HHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

XP_023003862.1 zinc finger protein 2-like [Cucurbita maxima]2.0e-4471.14Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT
        MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+T
Subjt:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT

Query:  APSPLVI-----DGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        A +PLVI     DGGR +IR F A+ + L   HHH  DDIGHLDLSLRL
Subjt:  APSPLVI-----DGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

XP_023516743.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]1.6e-7097.18Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDH SNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHH-QADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL HHHH QADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHH-QADDIGHLDLSLRL

TrEMBL top hitse value%identityAlignment
A0A6J1BYT1 protein LATE FLOWERING5.3e-2758.6Show/hide
Query:  MEFKHHQQLNLELVLEPS--SPSSSAPV------SPNC--EAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMR--AYRGDHESN---NVMM
        MEFK H QLNLELVLEPS  S SSS+ V      +PNC  + ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM
Subjt:  MEFKHHQQLNLELVLEPS--SPSSSAPV------SPNC--EAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMR--AYRGDHESN---NVMM

Query:  -KSSHLWKVETLTAPSPLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
          S+HLWK+ET      L   GG D   A   D  +      +Q      LDLSLRL
Subjt:  -KSSHLWKVETLTAPSPLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

A0A6J1E5I0 zinc finger protein 72.0e-74100Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

A0A6J1JAI3 zinc finger protein 7-like9.2e-7297.87Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPS

Query:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL  HHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

A0A6J1KNT5 zinc finger protein 2-like9.5e-4571.14Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT
        MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+T
Subjt:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT

Query:  APSPLVI-----DGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
        A +PLVI     DGGR +IR F A+ + L   HHH  DDIGHLDLSLRL
Subjt:  APSPLVI-----DGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

A0A6J5TF83 C2H2-type domain-containing protein5.6e-2150Show/hide
Query:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM-----RAYRGDHE---SNNVMMKSSHLWKVETLT
        + Q+NL+LVLEPS  SSS+ +SP+ E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE      RA+ G ++    +N    SSH  ++    
Subjt:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM-----RAYRGDHE---SNNVMMKSSHLWKVETLT

Query:  APSPLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL
            L    G      F    N      ++  ++IGHLDLSLRL
Subjt:  APSPLVIDGGRDQIRAFPADQNLLLLHHHHQADDIGHLDLSLRL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 25.4e-2176.71Show/hide
Query:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

Q39262 Zinc finger protein 32.5e-1050.72Show/hide
Query:  HHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRA
        H+    L L+      +S    S      ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + M A
Subjt:  HHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRA

Q39263 Zinc finger protein 43.5e-1260.32Show/hide
Query:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++  M
Subjt:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

Q39266 Zinc finger protein 74.9e-1453.57Show/hide
Query:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPSPLV
        S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       S+++ M++       TL+ P PLV
Subjt:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPSPLV

Q42485 Zinc finger protein 15.1e-1160.94Show/hide
Query:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 73.5e-1553.57Show/hide
Query:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPSPLV
        S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       S+++ M++       TL+ P PLV
Subjt:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPSPLV

AT1G66140.1 zinc finger protein 42.5e-1360.32Show/hide
Query:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++  M
Subjt:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

AT1G80730.1 zinc-finger protein 13.6e-1260.94Show/hide
Query:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein3.6e-1257.58Show/hide
Query:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +Q+LNL   LE    + S   S + E  ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + M
Subjt:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

AT5G57520.1 zinc finger protein 23.9e-2276.71Show/hide
Query:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCGCCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTC
GTGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCAT
ACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCATCACCTCTAGTAATTGATGGTGGGAGAGATCAG
ATAAGGGCTTTTCCAGCTGATCAAAATCTCCTTCTTCTTCATCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCGCCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTC
GTGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCAT
ACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCATCACCTCTAGTAATTGATGGTGGGAGAGATCAG
ATAAGGGCTTTTCCAGCTGATCAAAATCTCCTTCTTCTTCATCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA
Protein sequenceShow/hide protein sequence
MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPSPLVIDGGRDQ
IRAFPADQNLLLLHHHHQADDIGHLDLSLRL