; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G004400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box domain-containing protein
Genome locationCmo_Chr10:1996288..1996914
RNA-Seq ExpressionCmoCh10G004400
SyntenyCmoCh10G004400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN33275.1 unknown [Zea mays]2.5e-0662.26Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFGN
        P  QTQA SALK  KE + GA  QS  T PP VAQSSAFH+L Y L+GC  GN
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFGN

GER41768.1 methionine aminopeptidase 1B [Striga asiatica]3.9e-0746.34Show/hide
Query:  NSSSIYCLELL----REPLVS--CGRSWTRPEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        N +  YC EL      + L    C +    PE      +ALKF+ E   GAW+QSVFT+PPLVAQSSAF +LEY  +G  FG
Subjt:  NSSSIYCLELL----REPLVS--CGRSWTRPEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

KAF5956614.1 hypothetical protein HYC85_003839 [Camellia sinensis]6.6e-0769.23Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        PE  T A SALKF  EV  GA VQSV  +PPLVAQSSAF  LEY LIG FFG
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

MCH93084.1 hypothetical protein [Trifolium medium]5.4e-0972.55Show/hide
Query:  EDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        E QTQA  ALKFL    NGAW QSVFT+PPLVAQ SAFH+LEYIL+  FFG
Subjt:  EDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

RYR30295.1 hypothetical protein Ahy_B01g055097 isoform D [Arachis hypogaea]7.6e-1178.85Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        P D  QA SALKFL E  NGA+VQSVFT+PPLVAQSSAFHKLEYILIG  FG
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

TrEMBL top hitse value%identityAlignment
A0A392N3L2 Uncharacterized protein (Fragment)2.6e-0972.55Show/hide
Query:  EDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        E QTQA  ALKFL    NGAW QSVFT+PPLVAQ SAFH+LEYIL+  FFG
Subjt:  EDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

A0A445ENG9 Uncharacterized protein3.7e-1178.85Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        P D  QA SALKFL E  NGA+VQSVFT+PPLVAQSSAFHKLEYILIG  FG
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

A0A5A7Q9Z0 Methionine aminopeptidase 1B1.9e-0746.34Show/hide
Query:  NSSSIYCLELL----REPLVS--CGRSWTRPEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        N +  YC EL      + L    C +    PE      +ALKF+ E   GAW+QSVFT+PPLVAQSSAF +LEY  +G  FG
Subjt:  NSSSIYCLELL----REPLVS--CGRSWTRPEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

A0A7J7HWZ4 F-box domain-containing protein3.2e-0769.23Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG
        PE  T A SALKF  EV  GA VQSV  +PPLVAQSSAF  LEY LIG FFG
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFG

C0PDK9 Uncharacterized protein1.2e-0662.26Show/hide
Query:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFGN
        P  QTQA SALK  KE + GA  QS  T PP VAQSSAFH+L Y L+GC  GN
Subjt:  PEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQSSAFHKLEYILIGCFFGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGCCGGTGACAGGGATCAAGGATTCCCAACACTTTTTTGTTGCTTTCAAAAGTTTCCCATTACTTTGGTTTTTAATGCATATAAATATAACTGTTCTGATTCT
TATGCGCCTATTTGCTGACATCTTCAATTCATTACTCTTTTATAACTCTTCTTCCATTTATTGCCTCGAGCTCTTGCGAGAGCCATTGGTTAGCTGTGGAAGAAGCTGGA
CCAGACCAGAAGACCAAACGCAAGCGCTGTCGGCATTGAAGTTTCTAAAGGAGGTTTCAAATGGGGCTTGGGTCCAGTCTGTTTTCACAAACCCACCTCTCGTGGCCCAA
TCATCAGCATTCCACAAGCTGGAGTATATTCTCATTGGTTGCTTCTTTGGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGCCGGTGACAGGGATCAAGGATTCCCAACACTTTTTTGTTGCTTTCAAAAGTTTCCCATTACTTTGGTTTTTAATGCATATAAATATAACTGTTCTGATTCT
TATGCGCCTATTTGCTGACATCTTCAATTCATTACTCTTTTATAACTCTTCTTCCATTTATTGCCTCGAGCTCTTGCGAGAGCCATTGGTTAGCTGTGGAAGAAGCTGGA
CCAGACCAGAAGACCAAACGCAAGCGCTGTCGGCATTGAAGTTTCTAAAGGAGGTTTCAAATGGGGCTTGGGTCCAGTCTGTTTTCACAAACCCACCTCTCGTGGCCCAA
TCATCAGCATTCCACAAGCTGGAGTATATTCTCATTGGTTGCTTCTTTGGAAATTGA
Protein sequenceShow/hide protein sequence
MGWPVTGIKDSQHFFVAFKSFPLLWFLMHINITVLILMRLFADIFNSLLFYNSSSIYCLELLREPLVSCGRSWTRPEDQTQALSALKFLKEVSNGAWVQSVFTNPPLVAQ
SSAFHKLEYILIGCFFGN