CuGenDBv2

Gene ID	CmoCh10G004700
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	glycine-rich cell wall structural protein 2-like
Genome location	Cmo_Chr10:2099687..2100196
RNA-Seq Expression	CmoCh10G004700
Synteny	CmoCh10G004700
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589745.1 hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-52

96.45

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVI+SQARVARKDLGLDLGGLGVGIGTGIGLGLG    GSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSG NRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_022921881.1 cell wall protein IFF6-like isoform X1 [Cucurbita moschata]

2.1e-56

100

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_022921882.1 putative per-hexamer repeat protein 5 isoform X2 [Cucurbita moschata]

4.3e-46

88.17

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRN                    GGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]

1.3e-45

88.17

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSS                    
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_023515817.1 cell wall protein IFF6-like isoform X1 [Cucurbita pepo subsp. pepo]

7.3e-54

97.63

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFS I+SQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGS SG NRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTK9 Uncharacterized protein

3.7e-35

79.53

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Query:  MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRA
        MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY     
Subjt:  MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRA

Query:  GSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN
                   AGSYAGSRAGSGSG NRNGGSG GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  GSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like

1.3e-35

78.82

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Query:  MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRA
        MASI SL +VVC LLSFSV LS+ RVARKDLG+DLGGLGVG+G GIGLG+GGSGSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY     
Subjt:  MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRA

Query:  GSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
                   AGSYAGSRAGSGSG NRNGGSG GSGYGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Subjt:  GSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E1M3 putative per-hexamer repeat protein 5 isoform X2

2.1e-46

88.17

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRN                    GGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E2L1 cell wall protein IFF6-like isoform X1

1.0e-56

100

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X3

6.1e-46

88.17

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Query:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG
        MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSS                    
Subjt:  MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAG

Query:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30450.1 glycine-rich protein

3.8e-16

72.34

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Query:  LLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGL-GGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGS
        ++S  V+L+++R+ARKDLG+DLGG+G+G+G G+G+GL GGSGSG+G+GSGSGSGS SSSSSSSSS SSSSGSG  AGS AGS+AGSRAGSGSG+
Subjt:  LLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGL-GGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGS

AT4G30460.1 glycine-rich protein

7.9e-22

64.24

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Query:  NSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSG-AGSEAGSYAGSRAGSGS
        +SLI++  +L+ SV++S++RVARKDLGLDLGG+G GIG GIG+G GGSGSG+G+GSGSG G  SSSSSSSSS SSSSG G G AGSEAGSYAGS AGSGS
Subjt:  NSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSG-AGSEAGSYAGSRAGSGS

Query:  GSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG
                    G R+GSG    R  GSG G G+GGG G G G GGG G G G GYGEG GYGGG
Subjt:  GSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG

Sequences

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CDS sequence

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ATGGCTTCAATCAACTCCCTGATTGTTGTTTGCTTCTTACTCTCTTTCTCCGTCATTCTCTCTCAAGCTCGAGTGGCCAGGAAGGATCTCGGCCTTGACCTTGGAGGACT
CGGTGTTGGAATTGGAACCGGAATAGGCCTAGGCTTAGGTGGCAGTGGCTCCGGATCCGGTTCTGGATCCGGATCCGGATCCGGATCTGGCTCGAGCTCATCTTCGTCAT
CATCATCGTACTCCTCGAGCTCAGGCTCCGGGTCCGGAGCTGGGTCTGAAGCTGGCTCTTACGCTGGGTCTCGGGCAGGCTCAGGGTCCGGGTCCGGAGCTGGGTCTGAA
GCTGGCTCTTACGCAGGGTCTCGGGCAGGCTCAGGTTCTGGGCCGAACAGGAATGGAGGCTCGGGATCTGGCTCGGGATACGGCGGAGGTTCGGGCAGAGGAAGCGGCAA
CGGCGGAGGTGAAGGATACGGGGAAGGTCATGGCTATGGCGAGGGTCGCGGTTATGGCGGAGGCAACTAA

mRNA sequence

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Protein sequence

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MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSE
AGSYAGSRAGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

CmoCh10G004700 (gene) of Cucurbita moschata (Rifu) v1 genome