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CmoCh10G004710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein DOT1-like
Genome locationCmo_Chr10:2101349..2101765
RNA-Seq ExpressionCmoCh10G004710
SyntenyCmoCh10G004710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589746.1 hypothetical protein SDJN03_15169, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4277.46Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
        MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGG    GSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY

Query:  AGSRGGSDSGRNYRNGGS-----------------------------------GYGEGRGYGEGRGYGEGGNN
        AGSRGGSDSGRNYRNGGS                                   GYGEGRGYGEGRGYGEGGNN
Subjt:  AGSRGGSDSGRNYRNGGS-----------------------------------GYGEGRGYGEGRGYGEGGNN

XP_008443814.1 PREDICTED: glycine-rich protein DOT1-like [Cucumis melo]2.4e-3181.29Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS
        M SI+AI VLC V+CMS IES+ GRVARK+LGLDLGGLGVGLG+GLGLG+GGGSGSG+G+GSGSGSGSGSGS S SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        YAGSR GS S R  RNG SG GE  GYGEG GYGEGGNN
Subjt:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

XP_022921885.1 glycine-rich protein DOT1-like [Cucurbita moschata]1.4e-50100Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
        MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY

Query:  AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
Subjt:  AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

XP_022988594.1 putative glycine-rich cell wall structural protein 1 isoform X1 [Cucurbita maxima]9.9e-3374.51Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYG---------------
        M S   + VLCF++  SAI SQ RVARKDLGLDLGGLGVG+G G+GLGL GGSGSGSGSGSGSGSGS S S SYSSS SS S  G               
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYG---------------

Query:  GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYG GRGYGEGRGYGEGGNN
Subjt:  GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

XP_023515820.1 putative glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]8.1e-4380.61Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
        MTSIR+IAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGG    GSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY

Query:  AGSRGGSDSGRNYRNGGS---------------------------GYGEGRGYGEGRGYGEGGNN
        AGSRGGSDSGRNYRNGGS                           GYGEGRGYGEGRGYGEGGNN
Subjt:  AGSRGGSDSGRNYRNGGS---------------------------GYGEGRGYGEGRGYGEGGNN

TrEMBL top hitse value%identityAlignment
A0A0A0LW94 Uncharacterized protein1.5e-3182.73Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS
        M SI+AIAVLC V+CMS IES+ GRVARKDLGLDLGGLGVGLG+GLGLGLGGGSGSG+G+GSGSGSGSGS S   SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        YAGSR GS SG   RNG SG GEG GYGEG GYGEGGNN
Subjt:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

A0A1S3B9P9 glycine-rich protein DOT1-like1.2e-3181.29Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS
        M SI+AI VLC V+CMS IES+ GRVARK+LGLDLGGLGVGLG+GLGLG+GGGSGSG+G+GSGSGSGSGSGS S SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        YAGSR GS S R  RNG SG GE  GYGEG GYGEGGNN
Subjt:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

A0A5A7SV53 Glycine-rich protein DOT1-like1.2e-3181.29Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS
        M SI+AI VLC V+CMS IES+ GRVARK+LGLDLGGLGVGLG+GLGLG+GGGSGSG+G+GSGSGSGSGSGS S SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MTSIRAIAVLCFVVCMSAIESQ-GRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        YAGSR GS S R  RNG SG GE  GYGEG GYGEGGNN
Subjt:  YAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

A0A6J1E720 glycine-rich protein DOT1-like6.7e-51100Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
        MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSY

Query:  AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
Subjt:  AGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

A0A6J1JM06 putative glycine-rich cell wall structural protein 1 isoform X14.8e-3374.51Show/hide
Query:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYG---------------
        M S   + VLCF++  SAI SQ RVARKDLGLDLGGLGVG+G G+GLGL GGSGSGSGSGSGSGSGS S S SYSSS SS S  G               
Subjt:  MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYG---------------

Query:  GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN
        GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYG GRGYGEGRGYGEGGNN
Subjt:  GSGAGSEAGSYAGSYAGSRGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEGGNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein3.8e-1462.16Show/hide
Query:  MTSIRAIAVLCFVVCMSAIE-SQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS
        M     + +L  VV  S +  ++ R+ARKDLG+DLGG+G+GLGVGLG+GLGGGSGSG+G+GSGSGSGS S S S SSS SSSS  GGS     AGS AGS
Subjt:  MTSIRAIAVLCFVVCMSAIE-SQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRGGSDSG
        +AGSR GS SG
Subjt:  YAGSRGGSDSG

AT4G30460.1 glycine-rich protein1.4e-1653.02Show/hide
Query:  AIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSYAGS--
        ++ ++  ++  S + S+ RVARKDLGLDLGG+G G+G+G+G+G GGGSGSG+G+GSGSG G  S S S SSS SSSS  GG  AGSEAGSYAGS+AGS  
Subjt:  AIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSYAGS--

Query:  -----------------RGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEG
                          GG   G   R GG G G G GYGEG GYG G
Subjt:  -----------------RGGSDSGRNYRNGGSGYGEGRGYGEGRGYGEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCATCAGGGCTATTGCTGTTCTTTGCTTCGTGGTCTGTATGTCTGCGATTGAGTCACAAGGCCGTGTGGCCAGGAAGGACCTGGGTCTTGATCTTGGTGGCTT
GGGAGTTGGCCTTGGTGTTGGCTTGGGCTTGGGCTTAGGCGGTGGAAGTGGAAGTGGCAGTGGCAGTGGAAGTGGCAGTGGAAGTGGCTCGGGTTCTGGTTCTGGATCGT
ATTCGTCGTCCCAGTCGTCAAGCTCTAGCTATGGAGGCTCCGGCGCAGGCTCAGAAGCTGGTTCCTACGCTGGCTCTTATGCTGGGTCACGTGGAGGCTCGGATTCGGGA
AGGAATTACAGGAATGGTGGTTCGGGTTATGGGGAGGGTCGTGGCTATGGCGAGGGACGTGGATACGGCGAAGGCGGGAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCATCAGGGCTATTGCTGTTCTTTGCTTCGTGGTCTGTATGTCTGCGATTGAGTCACAAGGCCGTGTGGCCAGGAAGGACCTGGGTCTTGATCTTGGTGGCTT
GGGAGTTGGCCTTGGTGTTGGCTTGGGCTTGGGCTTAGGCGGTGGAAGTGGAAGTGGCAGTGGCAGTGGAAGTGGCAGTGGAAGTGGCTCGGGTTCTGGTTCTGGATCGT
ATTCGTCGTCCCAGTCGTCAAGCTCTAGCTATGGAGGCTCCGGCGCAGGCTCAGAAGCTGGTTCCTACGCTGGCTCTTATGCTGGGTCACGTGGAGGCTCGGATTCGGGA
AGGAATTACAGGAATGGTGGTTCGGGTTATGGGGAGGGTCGTGGCTATGGCGAGGGACGTGGATACGGCGAAGGCGGGAACAACTGA
Protein sequenceShow/hide protein sequence
MTSIRAIAVLCFVVCMSAIESQGRVARKDLGLDLGGLGVGLGVGLGLGLGGGSGSGSGSGSGSGSGSGSGSGSYSSSQSSSSSYGGSGAGSEAGSYAGSYAGSRGGSDSG
RNYRNGGSGYGEGRGYGEGRGYGEGGNN