CuGenDBv2

Gene ID	CmoCh10G004730
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	glycine-rich cell wall structural protein 2-like
Genome location	Cmo_Chr10:2103196..2103573
RNA-Seq Expression	CmoCh10G004730
Synteny	CmoCh10G004730
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589747.1 hypothetical protein SDJN03_15170, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-33

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLG    GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SG RGGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

XP_004146662.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]

7.1e-30

90.62

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVV-SESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGS--GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        MGS KSL+LAA+LVSSL VV S+SRVARKDLGLDLGGVG+G+GAG+GIGLGGSGS  GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
Subjt:  MGSWKSLLLAAMLVSSLLVV-SESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGS--GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGRGGGGSGYGGGYGSGYGGGHGK
        GSGSGGRGG GSGYGGGYGSGYGGGHGK
Subjt:  GSGSGGRGGGGSGYGGGYGSGYGGGHGK

XP_022921886.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]

4.6e-37

100

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SGGRGGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

XP_022988598.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]

6.2e-34

96.8

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MG  KSL+LAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SGG GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

XP_023515822.1 counting factor 45-1-like [Cucurbita pepo subsp. pepo]

5.6e-35

98.4

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLG  GSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SGGRGGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWP0 Uncharacterized protein

3.4e-30

90.62

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVV-SESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGS--GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        MGS KSL+LAA+LVSSL VV S+SRVARKDLGLDLGGVG+G+GAG+GIGLGGSGS  GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
Subjt:  MGSWKSLLLAAMLVSSLLVV-SESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGS--GSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGRGGGGSGYGGGYGSGYGGGHGK
        GSGSGGRGG GSGYGGGYGSGYGGGHGK
Subjt:  GSGSGGRGGGGSGYGGGYGSGYGGGHGK

A0A1S4DUX4 glycine-rich cell wall structural protein 2-like

5.9e-30

88.98

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGS KSL+LAA+LVSS  VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGSGSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRG--GGGSGYGGGYGSGYGGGHGK
        S GRG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRG--GGGSGYGGGYGSGYGGGHGK

A0A5A7T0K2 Glycine-rich cell wall structural protein 2-like

5.9e-30

88.98

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGS KSL+LAA+LVSS  VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGSGSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRG--GGGSGYGGGYGSGYGGGHGK
        S GRG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRG--GGGSGYGGGYGSGYGGGHGK

A0A6J1E2L6 glycine-rich cell wall structural protein 2-like

2.2e-37

100

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SGGRGGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

A0A6J1JMR8 glycine-rich cell wall structural protein 2-like

3.0e-34

96.8

Show/hide

Query:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MG  KSL+LAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGSGYGGGYGSGYGGGHGK
        SGG GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGSGYGGGYGSGYGGGHGK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30450.1 glycine-rich protein

1.5e-17

72.45

Show/hide

Query:  LLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLG---GSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        LL  +++SSL++++ESR+ARKDLG+DLGG+G+G+G G+GIGLG   GSG+G+GSGSGSGS SSSSSSSSSSSSSSGSG  +GS AGS+AGSRAGSGSG
Subjt:  LLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLG---GSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein

1.0e-18

72.13

Show/hide

Query:  SLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGS---GSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        SL+L  +++++ ++VSESRVARKDLGLDLGG+G GIG GIGIG GGSGSG+G+GSGS   GSSSSSSSSSSSSSSS G G D+GSEAGSYAGS AGSGSG
Subjt:  SLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGS---GSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

Query:  GRGGGGSGYGGGYGSGYGGGHG
        GR G G G G G G G+GGG G
Subjt:  GRGGGGSGYGGGYGSGYGGGHG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTAGTTGGAAGTCCCTGCTTCTTGCTGCAATGCTTGTTTCGTCTCTTCTTGTGGTGTCCGAGAGCCGCGTGGCCAGGAAGGATTTGGGCCTTGACCTGGGTGGGGT
CGGCGTTGGGATTGGAGCTGGAATAGGCATTGGACTTGGTGGAAGTGGTTCCGGCTCCGGCTCCGGCTCTGGCTCTGGATCAAGTTCAAGCTCGAGCTCAAGTTCGAGTT
CTAGTTCTTCTTCTTCTGGGTCGGGGTCTGATTCTGGATCTGAAGCAGGCTCGTATGCCGGGTCTCGAGCAGGTTCTGGATCGGGTGGTCGCGGAGGTGGAGGGTCAGGC
TATGGTGGAGGATACGGGTCGGGTTATGGAGGCGGGCATGGAAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRGGGGSG
YGGGYGSGYGGGHGK

CmoCh10G004730 (gene) of Cucurbita moschata (Rifu) v1 genome