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CmoCh10G004950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G004950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:2210778..2211847
RNA-Seq ExpressionCmoCh10G004950
SyntenyCmoCh10G004950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589767.1 hypothetical protein SDJN03_15190, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5296.4Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPF  LLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKST SLLWDVS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLT
        CGFFSLCVLLT
Subjt:  CGFFSLCVLLT

KAG7023439.1 hypothetical protein SDJN02_14464, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5698.23Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_022921746.1 uncharacterized protein LOC111429900 [Cucurbita moschata]2.1e-57100Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_022988599.1 uncharacterized protein LOC111485797 [Cucurbita maxima]1.7e-5495.58Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLLLLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQ S+QINVGAAT+VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLW+VS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_023516536.1 uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo]2.6e-5597.35Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLLLLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQDSKQI VGAAT VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

TrEMBL top hitse value%identityAlignment
A0A0A0LW17 Uncharacterized protein1.1e-2761.06Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDV
        M+KG  LL L S++ L LLPFCL E +FT KA D  K LKQGRPRKD+Q S++++ GA+   VMRA+ VYGG NDIH GHSKNDAN L IKS SSL+W V
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDV

Query:  SCGFFSLCVLLTG
        S GF   CV++ G
Subjt:  SCGFFSLCVLLTG

A0A5A7SWW6 Uncharacterized protein5.5e-2761.4Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRK---DLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL
        M+KG  +L L S+LCL LLPFCL E +FT KA D  K LKQGRPRK   DLQ S++++ GAA   VMRA+ VYGG NDIH G SKNDAN LRIKS SSL+
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRK---DLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL

Query:  WDVSCGFFSLCVLL
        W VS GF   C+++
Subjt:  WDVSCGFFSLCVLL

A0A6J1C4Y5 uncharacterized protein LOC1110074321.8e-1452.99Show/hide
Query:  GPFLLLLISLLCLCLLPFCLS-EAHFTNKAYDPYK-HLKQGRPRKDLQ----DSKQINVGA-ATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL
        G  +LLLIS+     LP C S E +FT K  D YK  LKQGRP KDL+    +S++   GA A K+MRARGVYGG +D+ RGHSKNDA  LRIKS  S  
Subjt:  GPFLLLLISLLCLCLLPFCLS-EAHFTNKAYDPYK-HLKQGRPRKDLQ----DSKQINVGA-ATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL

Query:  WDVSCGFFSLCVLLTGL
        W+V C    + V  TGL
Subjt:  WDVSCGFFSLCVLLTGL

A0A6J1E284 uncharacterized protein LOC1114299001.0e-57100Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

A0A6J1JM10 uncharacterized protein LOC1114857978.1e-5595.58Show/hide
Query:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLLLLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQ S+QINVGAAT+VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLW+VS
Subjt:  MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAGGACCATTCCTTTTGCTCCTCATCTCCCTTCTTTGCCTCTGTCTCCTTCCATTTTGTCTATCTGAAGCCCATTTCACCAACAAAGCTTATGATCCT
TACAAGCACCTGAAGCAGGGGAGGCCCAGAAAAGATTTGCAGGACAGTAAGCAGATAAACGTTGGAGCTGCAACGAAGGTGATGAGAGCAAGAGGAGTTTATGGC
GGGGGGAACGACATTCATAGGGGGCACTCGAAGAATGATGCTAACCCTTTACGGATCAAATCAACTTCTTCGTTGCTGTGGGATGTTTCATGTGGCTTCTTTAGT
TTATGTGTTCTTCTTACAGGTCTGTAA
mRNA sequenceShow/hide mRNA sequence
TGATGAGTTGATTTCTTATTTTAATGTTATATTTTAGGAATATCATGTTAGTGATACAATATTCCTAGAATTTAAGAACAATGCAAGAAGAAATTACAAAAGGAA
CTTCATTTTAAGCCACACATTCAATTTTTAAGAGGTAAGTTTTGAATTCTTTTGTGAAAGAAAAGGAAGAAAAAGATGATTTGAGTATATATTCTTATCCAATTA
TGTCTGTCTGTGAGCTATACACCTTTATAGGGGGCCACTATTGTTTCTTTTTAGTGGTTAAAAACATGTATGCCCCCCTCCATTGCTCGTTAGATTGAATTTGAA
CACCAAAAATCAATCAAACATGAGAAAAGGACCATTCCTTTTGCTCCTCATCTCCCTTCTTTGCCTCTGTCTCCTTCCATTTTGTCTATCTGAAGCCCATTTCAC
CAACAAAGCTTATGATCCTTACAAGCACCTGAAGCAGGGGAGGCCCAGAAAAGATTTGCAGGACAGTAAGCAGATAAACGTTGGAGCTGCAACGAAGGTGATGAG
AGCAAGAGGAGTTTATGGCGGGGGGAACGACATTCATAGGGGGCACTCGAAGAATGATGCTAACCCTTTACGGATCAAATCAACTTCTTCGTTGCTGTGGGATGT
TTCATGTGGCTTCTTTAGTTTATGTGTTCTTCTTACAGGTCTGTAAGTGTTGGCTCTGTTGTAGCAGCAGCAGAGCAGTCGAGTGTTATATTCTGTAATGCTTTG
GACCTTGTTCATGGGCAATGTTAGTATTCGATAACTCGACTTTGAAGCTTCATACCGCTTGATTCTCCGCATTTTCTTCTTCGTAGACCAGAATCTTGTTCTTTC
AAATCTGTTTAGCAAGCTTTAGTGGTTTAATCGATTGATCTTAGTGAAAATTTCCCCGTCGCAACGGATAGAAATTTTCTTCATGTACAGAAGGCAATTTGGTTC
CATGTAGAAAGAATCAGAGCTTAGCCAACTAGAGAAGAACTAG
Protein sequenceShow/hide protein sequence
MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFS
LCVLLTGL