; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G005480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G005480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
Genome locationCmo_Chr10:2468355..2469728
RNA-Seq ExpressionCmoCh10G005480
SyntenyCmoCh10G005480
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589815.1 hypothetical protein SDJN03_15238, partial [Cucurbita argyrosperma subsp. sororia]1.7e-9996.76Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

KAG7023486.1 hypothetical protein SDJN02_14511, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-10398.41Show/hide
Query:  MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR
        MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR
Subjt:  MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR

Query:  YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

XP_022961019.1 uncharacterized protein LOC111461650 isoform X1 [Cucurbita moschata]1.7e-9997.85Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

XP_022961020.1 uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata]6.8e-10198.38Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

XP_023516462.1 uncharacterized protein LOC111780320 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-9795.14Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFP HIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        GKDTI SHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSN+EDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

TrEMBL top hitse value%identityAlignment
A0A6J1BZ68 uncharacterized protein LOC1110068264.8e-8483.43Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++G+VPFSNQMDV SEED+SLARP+FMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRT+LE+RPAFKFAAHCNSEFP+HIES E+TF  PERIRY+SL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDS
        GKD ISSHG +++CGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLE  S VEDRSDP CPLC EP  K+DDS
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDS

A0A6J1HAS2 uncharacterized protein LOC111461650 isoform X23.3e-10198.38Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

A0A6J1HCS6 uncharacterized protein LOC111461650 isoform X18.2e-10097.85Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

A0A6J1JBJ7 uncharacterized protein LOC111485281 isoform X11.3e-9493.01Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTS+ NASTSRENRVRTILEKRP FKFAAHCNSEFPDHIESNE TFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
         GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDS  QE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

A0A6J1JKN5 uncharacterized protein LOC111485281 isoform X25.5e-9693.51Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ NASTSRENRVRTILEKRP FKFAAHCNSEFPDHIESNE TFLRPERIRYNS 
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDS  QE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein1.2e-1046.67Show/hide
Query:  CGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCME
        CG C KL+  +     + ++  +LPI AVL CGHVYHA CLE  +N  ++ DP CP+C E
Subjt:  CGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCME

AT1G75400.1 RING/U-box superfamily protein4.8e-1249.15Show/hide
Query:  VCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC
        VCG C KL+  +     +++++ ELPIAAVL CGHVYHA+CLE  +   ++ DP CP+C
Subjt:  VCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC

AT4G39140.1 RING/U-box superfamily protein1.0e-0925.29Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S ++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC
        I  HG ++       CG C + L  + L        ++EL ++A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC

AT4G39140.2 RING/U-box superfamily protein1.0e-0925.29Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S ++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC
        I  HG ++       CG C + L  + L        ++EL ++A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC

AT4G39140.3 RING/U-box superfamily protein1.0e-0925.29Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S ++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC
        I  HG ++       CG C + L  + L        ++EL ++A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCA
TCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTGAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAAT
TTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCA
TCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGCTGTCTTCCAGCGAACTTCCCATTGCTGCGGTTTT
GGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCGGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACG
ATTCAACCGAGCAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCA
TCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTGAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAAT
TTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCA
TCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGCTGTCTTCCAGCGAACTTCCCATTGCTGCGGTTTT
GGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCGGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACG
ATTCAACCGAGCAGGAATGAGTTGAGTTGTACATATGTTATCGCATAGCACCAACATAGGAAATAGACATAGTGATAATGAGTCGAAAAATGACGATTTGTTTTGCATAG
ATTGCTTCTTGGATAGAACTAGATCGATAACGACGTAAGCCCTTTCCGGATTATTGTAGCGGTAGAGGATTTTAGTTGAGACATCTTTTCTTCATGGATTATAGTCAGAC
TTCTTCACTAGTTAACAACTTTCCGAAGTAATGTGGC
Protein sequenceShow/hide protein sequence
MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTIS
SHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDDSTEQE