CuGenDBv2

Gene ID	CmoCh10G005830
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Epidermal patterning factor-like protein
Genome location	Cmo_Chr10:2655808..2657320
RNA-Seq Expression	CmoCh10G005830
Synteny	CmoCh10G005830
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

1.4e-33

78.22

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK
        MAL +SL LILPLIFSLS+ HPTSGNED SKQKEL IGSRPP+CFNKCLNC+PCVAALVISQRHKG  +N     S+LEAA   P+DDAYYLLSWKCKCK
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK

Query:  D
        D
Subjt:  D

XP_022961150.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]

2.7e-48

100

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

XP_022987916.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima]

1.3e-47

97.96

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        MALKSSLLLILPLIFSLSLSHPTSGNEDSS+QKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFS+LEAALPAPRDDAYYLLSWKCKCKD
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

XP_023516493.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]

8.7e-47

96.94

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        MALKSSLLLILPLIFSLSLSHPTSGNEDS KQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHN+AFS+LEAALPAPRDDAYYLLSWKCKCKD
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

1.4e-33

78.22

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK
        MAL +SL LILPLIFSLS+ HPTSGNED SKQKEL IGSRPP+CFNKCLNC+PCVAALVISQRHKG  +N     S+LEAA   P+DDAYYLLSWKCKCK
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZ19 Epidermal patterning factor-like protein

7.0e-34

78.22

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK
        MAL +SL LILPLIFSLS+ HPTSGNED SKQKEL IGSRPP+CFNKCLNC+PCVAALVISQRHKG  +N     S+LEAA   P+DDAYYLLSWKCKCK
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK

Query:  D
        D
Subjt:  D

A0A6J1F4W6 Epidermal patterning factor-like protein

5.0e-32

74.53

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Query:  MALKSSLLLILPLIFSLSLSHPT-----SGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSW
        MAL +SL LILPLIFSLS+ HPT     SGNED SKQKEL IGSRPP+CFNKCLNC+PCVAALVISQRHKG  +N     S+LEAA   P+DDAYYLLSW
Subjt:  MALKSSLLLILPLIFSLSLSHPT-----SGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSW

Query:  KCKCKD
        KCKCKD
Subjt:  KCKCKD

A0A6J1HB97 Epidermal patterning factor-like protein

1.3e-48

100

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

A0A6J1I4N2 Epidermal patterning factor-like protein

6.5e-32

76.24

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK
        MAL +SL LILPLIFSLS+  PTSGNED SKQKEL IGSRPP+CFNKCLNC+PCVAALVISQR KG  NN     S++EAA   P+DDAYYLLSWKCKCK
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNN---AFSSLEAALPAPRDDAYYLLSWKCKCK

Query:  D
        D
Subjt:  D

A0A6J1JFP8 Epidermal patterning factor-like protein

6.5e-48

97.96

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Query:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        MALKSSLLLILPLIFSLSLSHPTSGNEDSS+QKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFS+LEAALPAPRDDAYYLLSWKCKCKD
Subjt:  MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

SwissProt top hits

e value

%identity

Alignment

P43212 Polygalacturonase

5.6e-04

42.59

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Query:  SLSLSHPTS------GNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQR
        S S  HP +      G  D   +  +++GSRPP C NKC  C PC A LVI  R
Subjt:  SLSLSHPTS------GNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQR

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

2.7e-06

33.7

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Query:  LLILPLIFSLSLSHPTSG-NEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        L +  + FSL   H  SG +    + KE V+GS PP C  KC NC+PC+  L      +G H++   S          + YY + W C+C+D
Subjt:  LLILPLIFSLSLSHPTSG-NEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

1.9e-04

31.86

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Query:  ALKSSLLLILPLIFSLSLSHPTSG-----NEDSSKQKELV-----IGSRPPRCFNKCLNCRPCVAALV--ISQRHKGVHNNAFSSLEAALPA------PR
        A+  S LL+LPLI  L ++   S          S Q  L+     +GS PP C N+C NC PC+A  V  +  R +    N FS      P+       +
Subjt:  ALKSSLLLILPLIFSLSLSHPTSG-----NEDSSKQKELV-----IGSRPPRCFNKCLNCRPCVAALV--ISQRHKGVHNNAFSSLEAALPA------PR

Query:  DDAYYLLSWKCKC
           Y  + WKC C
Subjt:  DDAYYLLSWKCKC

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

1.9e-07

33.7

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Query:  LLILPLIFSLSLSHPTSG-NEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD
        L +  + FSL   H  SG +    + KE V+GS PP C  KC NC+PC+  L      +G H++   S          + YY + W C+C+D
Subjt:  LLILPLIFSLSLSHPTSG-NEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKD

AT5G10310.1 unknown protein

1.4e-05

31.86

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Query:  ALKSSLLLILPLIFSLSLSHPTSG-----NEDSSKQKELV-----IGSRPPRCFNKCLNCRPCVAALV--ISQRHKGVHNNAFSSLEAALPA------PR
        A+  S LL+LPLI  L ++   S          S Q  L+     +GS PP C N+C NC PC+A  V  +  R +    N FS      P+       +
Subjt:  ALKSSLLLILPLIFSLSLSHPTSG-----NEDSSKQKELV-----IGSRPPRCFNKCLNCRPCVAALV--ISQRHKGVHNNAFSSLEAALPA------PR

Query:  DDAYYLLSWKCKC
           Y  + WKC C
Subjt:  DDAYYLLSWKCKC

Sequences

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CDS sequence

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ATGGCTTTAAAAAGCTCTCTCCTTCTCATTCTTCCTCTCATATTTTCCCTTTCTCTCTCTCACCCCACATCAGGGAATGAGGATTCTTCAAAGCAGAAGGAATTGGTAAT
TGGGTCAAGGCCGCCACGGTGCTTCAACAAGTGCTTGAATTGCAGGCCATGTGTTGCTGCTTTGGTTATTTCTCAGCGCCATAAAGGGGTTCATAATAATGCTTTTTCTA
GTTTGGAGGCCGCTCTTCCAGCCCCTAGGGATGATGCCTATTATCTTCTCTCATGGAAATGTAAGTGTAAAGATAACTCTCAGCAAAAAGATCCTAAATTTAGTTTCAAT
GACATTCTGTACAATCCAAGCAGAATTTCCTATGTGGATGTCTTTTTCACTTTTCCATCCTCTTATTTCCAAGGGGTCGGGGTCGGGGTTGGCATAAAGAAAATTAAGCA
TACACACACAAACCGTACATACTTCCAGTTTTACATTATTTGCAGCTTAGCCTTTCCGTTTTCTAATTCATAA

mRNA sequence

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TCTCTCTCTCTCTCTCTCTGCCTTCACAAAATCACTCAAATATGGCTTTAAAAAGCTCTCTCCTTCTCATTCTTCCTCTCATATTTTCCCTTTCTCTCTCTCACCCCACA
TCAGGGAATGAGGATTCTTCAAAGCAGAAGGAATTGGTAATTGGGTCAAGGCCGCCACGGTGCTTCAACAAGTGCTTGAATTGCAGGCCATGTGTTGCTGCTTTGGTTAT
TTCTCAGCGCCATAAAGGGGTTCATAATAATGCTTTTTCTAGTTTGGAGGCCGCTCTTCCAGCCCCTAGGGATGATGCCTATTATCTTCTCTCATGGAAATGTAAGTGTA
AAGATAACTCTCAGCAAAAAGATCCTAAATTTAGTTTCAATGACATTCTGTACAATCCAAGCAGAATTTCCTATGTGGATGTCTTTTTCACTTTTCCATCCTCTTATTTC
CAAGGGGTCGGGGTCGGGGTTGGCATAAAGAAAATTAAGCATACACACACAAACCGTACATACTTCCAGTTTTACATTATTTGCAGCTTAGCCTTTCCGTTTTCTAATTC
ATAA

Protein sequence

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MALKSSLLLILPLIFSLSLSHPTSGNEDSSKQKELVIGSRPPRCFNKCLNCRPCVAALVISQRHKGVHNNAFSSLEAALPAPRDDAYYLLSWKCKCKDNSQQKDPKFSFN
DILYNPSRISYVDVFFTFPSSYFQGVGVGVGIKKIKHTHTNRTYFQFYIICSLAFPFSNS

CmoCh10G005830 (gene) of Cucurbita moschata (Rifu) v1 genome