CuGenDBv2

Gene ID	CmoCh10G006010
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	Cmo_Chr10:2724396..2731099
RNA-Seq Expression	CmoCh10G006010
Synteny	CmoCh10G006010
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589859.1 Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

97.28

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKN STNSSNQSPIESE EFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPP IQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDL +  S F + +
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

KAG7023531.1 Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

98.79

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKN STNSSNQSPIESE EFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_022961046.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata]

0.0e+00

100

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

97.73

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPN+CHSL FGFLSGCNMENPLERGKN STNSSNQSPIESEKEFTND+EYIKETNSLLRQVHHAIFSEQVFD VNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSH+M SVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNF+ISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_023516123.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]

0.0e+00

98.04

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKN STNSSNQSPIESEKEFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDAN  ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVF++SN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPP IQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.94

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+ENPLER KN STN SNQS +  EKEFTND+EYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP S LHP SI+ARTSD +QM +VTK+Q
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
         QGCLSWWLVMDDGL EDRK NF+ SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG G SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.03

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+ENPLE  KN +TN SNQ+ ++ EKEFTND+EYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ ILDN NLPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP SIQARTSDS+QM +VTK+Q
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+Y  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
         QGCLSWWLVMDDGL EDRK NF+ SDVVPEYRKFLG+LSLEVL STLMDLVSLCSG G SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.03

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+ENPLE  KN +TN SNQ+ ++ EKEFTND+EYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ ILDN NLPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP SIQARTSDS+QM +VTK+Q
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+Y  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
         QGCLSWWLVMDDGL EDRK NF+ SDVVPEYRKFLG+LSLEVL STLMDLVSLCSG G SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A6J1H995 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

100

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

97.73

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPN+CHSL FGFLSGCNMENPLERGKN STNSSNQSPIESEKEFTND+EYIKETNSLLRQVHHAIFSEQVFD VNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSH+M SVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNF+ISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

4.9e-213

58.42

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKK+SK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPS
        ANDAVTV GMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+  +NEGFTIDL D+   DP+
Subjt:  ANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPS

Query:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVD DS+GMLAI++P +S +SLRFG++    + N  E  ++  + + +  P  SEK   +D++Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL P+G++    +       ++  L  +S   +E  +  D   KKL  PN T++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV

Query:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV
        K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N+VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S +     + ++ D    K  
Subjt:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV

Query:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  P+VVGL K +S +++S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T G K SR+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC
        +PEDA+GC+SWWLVM++G TE+R       + V E RK LGHLSL+VL S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC

Q5ZID1 Mediator of RNA polymerase II transcription subunit 17

1.5e-04

19.68

Show/hide

Query:  MKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDK--------------KKQKKASKESATPWQWQSMIENLQLAHQELSVI
        +++S++    K+++ +  +G E +   +   +    L +RIDF+     ++D+              + ++   K   + W W S+  NL+ A  E+ V+
Subjt:  MKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDK--------------KKQKKASKESATPWQWQSMIENLQLAHQELSVI

Query:  IDLINTVEANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVA------REARFYGALIRLQQNWKVKR
         D+++ V+    +T+  + +  P P +      + + +K +      +   + A+ L + VA      R+  F   L+RL+Q+WK+++
Subjt:  IDLINTVEANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVA------REARFYGALIRLQQNWKVKR

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

3.4e-214

58.42

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKK+SK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPS
        ANDAVTV GMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+  +NEGFTIDL D+   DP+
Subjt:  ANDAVTVGGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPS

Query:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVD DS+GMLAI++P +S +SLRFG++    + N  E  ++  + + +  P  SEK   +D++Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL P+G++    +       ++  L  +S   +E  +  D   KKL  PN T++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV

Query:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV
        K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N+VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S +     + ++ D    K  
Subjt:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV

Query:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  P+VVGL K +S +++S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T G K SR+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC
        +PEDA+GC+SWWLVM++G TE+R       + V E RK LGHLSL+VL S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGATTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGGCCTCCAAGGAGAGTGCAACACCGTGGCAATGGC
AGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGATCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGGTGGGATGACAAGG
CCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAGTATTTCAAGCAGTCTGCTAAAGGTTT
GGAACGCCAGGTTGCCAGGGAAGCAAGATTTTATGGGGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGACAGCGCGTTGCTGCTGCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTTATCATGTGATCCTTCGTCTGTGTTTCGACCATCTTCGTCTACTATTCGTGTTGATCGTGATTCGTCTGGAATGCTGGCAATT
AGTTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGGTGTAATATGGAAAATCCTCTGGAACGTGGTAAAAATTCATCCACAAATTCATCCAATCA
GTCTCCAATTGAAAGTGAGAAGGAGTTTACAAATGACAATGAGTACATTAAGGAAACTAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTG
ATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAATGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACGTCGGTTTTTATCTCT
CTGGTGCCAACTGGTCAAAGCGGCCAAACAGTTGAAGATGCAAATACCTGGATTCTGGATAATACAAATTTACCTTTTGATTCGCTTGATGGGATTGAACTACCAGATAG
AAGTGATCCGCTTGAAAAGAAATTGCGGAATCCTAATTATACAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAAACCCA
TTTCATCATTAAGCAGGCAATCAGGTCAACCTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATATTCGCAAACAAGGTTCTTATG
GAGCTCGAAAATGTGGTTTGGAAAGTTCCATTTCTTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACGTTTTTTATGGAAGTTCCCCAGTCCAA
ACTTCATCCTCCTTCTATCCAGGCTCGTACATCAGATAGTCATCAAATGAAAAGTGTAACCAAATCACAATTTCAGACTAAAGTGGTTGTAAATGATGATTGCATCACTA
TTGAAGGGGAAGGTGCTCCTGATGTAGTTGGCTTGTTCAAGGGAAATTCCAAGGATATGTATTCAATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTTATAATC
CTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCCCTAACCTGGGGAATAAAGGTCAGCCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAAGG
TGAAACACTCCGTCTGGTCGCCCATGTGGACCCAGAAGATGCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCCTAACGGAGGACAGGAAACATAACTTCG
ACATCTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCAATCTACACTAATGGATTTGGTTAGTTTGTGCAGTGGATTTGGTAGC
AGCCTATAA

mRNA sequence

Show/hide mRNA sequence

TTAGGGCTCGCTCCAAATTTTTTCCCTCCCCACATTGTTACCGGGAAAATACCGTGTGAATATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCT
TGGAGGCCATAGAAGAAAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGATTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAG
GACGATGACAAAAAGAAGCAGAAGAAGGCCTCCAAGGAGAGTGCAACACCGTGGCAATGGCAGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTAT
CATAGATCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGGTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAG
CAACGAAACTACAATGCTTTCGACATCTTGGTAAGTATTTCAAGCAGTCTGCTAAAGGTTTGGAACGCCAGGTTGCCAGGGAAGCAAGATTTTATGGGGCTTTAATTCGA
TTGCAGCAAAATTGGAAGGTTAAAAGACAGCGCGTTGCTGCTGCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTTATCATGTGATCCTTCGTCTGT
GTTTCGACCATCTTCGTCTACTATTCGTGTTGATCGTGATTCGTCTGGAATGCTGGCAATTAGTTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTG
GGTGTAATATGGAAAATCCTCTGGAACGTGGTAAAAATTCATCCACAAATTCATCCAATCAGTCTCCAATTGAAAGTGAGAAGGAGTTTACAAATGACAATGAGTACATT
AAGGAAACTAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAATGTGAC
TGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACGTCGGTTTTTATCTCTCTGGTGCCAACTGGTCAAAGCGGCCAAACAGTTGAAGATGCAAATACCT
GGATTCTGGATAATACAAATTTACCTTTTGATTCGCTTGATGGGATTGAACTACCAGATAGAAGTGATCCGCTTGAAAAGAAATTGCGGAATCCTAATTATACAACCTTT
GAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAAACCCATTTCATCATTAAGCAGGCAATCAGGTCAACCTTCTAATGATGGGTCTGG
ACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATATTCGCAAACAAGGTTCTTATGGAGCTCGAAAATGTGGTTTGGAAAGTTCCATTTCTTCAATTGATATCTC
ATCCCACTTGGAATTCTCGAAAATCTTCATGGACGTTTTTTATGGAAGTTCCCCAGTCCAAACTTCATCCTCCTTCTATCCAGGCTCGTACATCAGATAGTCATCAAATG
AAAAGTGTAACCAAATCACAATTTCAGACTAAAGTGGTTGTAAATGATGATTGCATCACTATTGAAGGGGAAGGTGCTCCTGATGTAGTTGGCTTGTTCAAGGGAAATTC
CAAGGATATGTATTCAATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTTATAATCCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCCC
TAACCTGGGGAATAAAGGTCAGCCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTCGCCCATGTGGACCCAGAAGATGCTCAAGGA
TGCCTTTCTTGGTGGTTGGTAATGGACGATGGCCTAACGGAGGACAGGAAACATAACTTCGACATCTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATC
TCTGGAAGTTTTGCAATCTACACTAATGGATTTGGTTAGTTTGTGCAGTGGATTTGGTAGCAGCCTATAACCATGCTTACTTGTCTGGTATTACAAACAGAAATTGCATC
GAGCTCTTGTAATTTCTGCCCATGTTTTCAAATCTAATGAAATCACCACTTTTTGTCCGCATTGCTTACTCACCTTCATATGTTATTCATAATAGCTAATGTAGGGCGCA
TGACATGGATGGCTGGAAGCTGACTTCAAGAGGAAGAAACCGT

Protein sequence

Show/hide protein sequence

MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVGGMTR
PKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAPANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAI
SLPPNSCHSLRFGFLSGCNMENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFIS
LVPTGQSGQTVEDANTWILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLM
ELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVII
LLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGS
SL

CmoCh10G006010 (gene) of Cucurbita moschata (Rifu) v1 genome