; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G006460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G006460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine-rich protein-related
Genome locationCmo_Chr10:2968099..2968359
RNA-Seq ExpressionCmoCh10G006460
SyntenyCmoCh10G006460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]1.3e-2780Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        M +  K+ ISIPS+AKS GDGDGVA H+CSSK QCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]6.2e-2579.27Show/hide
Query:  KIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        K+ I IPS+AKS G+GDGV   +H+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  KIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

KAF3961111.1 hypothetical protein CMV_014232 [Castanea mollissima]1.5e-1052.33Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        M++HG + +S  +S KS G+G+ V   + S KGQCLCSPTTH GSFRCR HRS+S  W + SKA  ++ + A+     SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3898.84Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSK TASSSADASHTSDLSPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST

OUZ99929.1 hypothetical protein BVC80_9069g38 [Macleaya cordata]8.7e-1152.87Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        M++HG I +S+  S K  G+G  VA A T S KGQCLCSPTTH GSFRCR HRS S  W      +  +++ A+ T+ +SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein7.9e-2675.86Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        M +  K+ I IPS+AKS G+GDGV   +H+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

A0A200PNZ0 Uncharacterized protein4.2e-1152.87Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        M++HG I +S+  S K  G+G  VA A T S KGQCLCSPTTH GSFRCR HRS S  W      +  +++ A+ T+ +SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST

A0A2C9W3X4 Uncharacterized protein3.9e-0950Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHR--SNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        M++H  I +S  +S KS  +G+G  A + S KGQCLCSPTTH GSFRCR HR  S+  P  + SK+   + A     + LSPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHR--SNSLPWTRHSKATASSSADASHTSDLSPKSVEST

A0A5D3BJV5 Uncharacterized protein6.5e-2880Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        M +  K+ ISIPS+AKS GDGDGVA H+CSSK QCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

A0A5N6QHE2 Uncharacterized protein1.4e-0951.16Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST
        M++HG + +S  +S KS G  + V   + S KGQCLCSPTTH GSFRCR HRS+S  W + SK   S  A  S  + +SPKS+EST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein3.1e-0642.86Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSL
        M+  G +      +A  +G   G++  T  +K  C+CSPTTHPGSF+C+LHR+ SL
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSL

AT1G67910.1 unknown protein1.6e-0746.58Show/hide
Query:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        +SA  VG   G++  T  +K  CLCSPTTHPGSFRCR+HRS SL  T+        S +A+   D  PK  +S
Subjt:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

AT1G67910.2 unknown protein1.6e-0746.58Show/hide
Query:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES
        +SA  VG   G++  T  +K  CLCSPTTHPGSFRCR+HRS SL  T+        S +A+   D  PK  +S
Subjt:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVES

AT5G25280.1 serine-rich protein-related1.5e-0556.76Show/hide
Query:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATAS
        S+ +C+CSPTTHPGSFRC LH++ + P   H + TAS
Subjt:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATAS

AT5G25280.2 serine-rich protein-related1.5e-0556.76Show/hide
Query:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATAS
        S+ +C+CSPTTHPGSFRC LH++ + P   H + TAS
Subjt:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCCACGGAAAAATCAGGATCAGCATCCCTTCCTCCGCCAAAAGCGTTGGCGACGGTGACGGCGTGGCGGCTCACACATGTTCATCCAAAGGCCAATGCCTCTG
CTCGCCCACCACTCATCCTGGATCCTTCCGTTGTCGTCTTCACCGTTCCAATTCGTTGCCCTGGACCAGGCACTCCAAGGCCACTGCGTCGTCTTCGGCCGACGCCTCTC
ACACCTCAGATCTTTCTCCCAAGTCAGTTGAATCTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCCACGGAAAAATCAGGATCAGCATCCCTTCCTCCGCCAAAAGCGTTGGCGACGGTGACGGCGTGGCGGCTCACACATGTTCATCCAAAGGCCAATGCCTCTG
CTCGCCCACCACTCATCCTGGATCCTTCCGTTGTCGTCTTCACCGTTCCAATTCGTTGCCCTGGACCAGGCACTCCAAGGCCACTGCGTCGTCTTCGGCCGACGCCTCTC
ACACCTCAGATCTTTCTCCCAAGTCAGTTGAATCTACTTGA
Protein sequenceShow/hide protein sequence
MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKATASSSADASHTSDLSPKSVEST