; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G006500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G006500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCoiled-coil domain-containing protein 9-like
Genome locationCmo_Chr10:2978042..2980581
RNA-Seq ExpressionCmoCh10G006500
SyntenyCmoCh10G006500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589907.1 hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3591.01Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        MASICLLSSKTLVLPSAAYLP+SSSSST+HSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPI +    P
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP

XP_022960823.1 uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]2.4e-3693.26Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPI +    P
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP

XP_022960824.1 uncharacterized protein LOC111461515 isoform X2 [Cucurbita moschata]5.3e-44100Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL
        MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL

XP_022987896.1 uncharacterized protein LOC111485300 isoform X2 [Cucurbita maxima]9.4e-4192.71Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRLY
        MASICLLSSKTL LPSAAYLPI SSSST+HSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP+CLFRLY
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRLY

XP_023516605.1 uncharacterized protein LOC111780429 isoform X2 [Cucurbita pepo subsp. pepo]3.8e-4294.74Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL
        MASICLLSSKTLVLPSAAYLPISSSSST+HSCCFGGCRFSFP+KPIS SNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP+CLFRL
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL

TrEMBL top hitse value%identityAlignment
A0A1S4E470 uncharacterized protein LOC103501552 isoform X16.2e-3071.82Show/hide
Query:  RKIMASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIV-------FPAT---
        RK MASI L SSKTLV PSA YL ISSSSST+HSCC GGCR SFP KP+STSNLI  RRRTGR VVRMAPEEEK+TRRNPLDFPIV       +P T   
Subjt:  RKIMASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIV-------FPAT---

Query:  --VPLCLFRL
          V  CLFRL
Subjt:  --VPLCLFRL

A0A6J1HA36 uncharacterized protein LOC111461515 isoform X11.2e-3693.26Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPI +    P
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP

A0A6J1HC85 uncharacterized protein LOC111461515 isoform X22.6e-44100Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL
        MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRL

A0A6J1JFM9 uncharacterized protein LOC111485300 isoform X24.5e-4192.71Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRLY
        MASICLLSSKTL LPSAAYLPI SSSST+HSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP+CLFRLY
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRLY

A0A6J1JI28 uncharacterized protein LOC111485300 isoform X15.9e-3386.52Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        MASICLLSSKTL LPSAAYLPI SSSST+HSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPI +    P
Subjt:  MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17240.1 unknown protein4.7e-0642.86Show/hide
Query:  MASICLLSSKTLVLPSAAYLPISS--SSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        MAS+C  S++ L  PS   L   +  SS +    C     F+F S   S+S     R R    VV MAPEEEK+TRRNPLDFPI +    P
Subjt:  MASICLLSSKTLVLPSAAYLPISS--SSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP

AT3G24506.1 unknown protein7.5e-0440.54Show/hide
Query:  PISSSS----STTHSCCFGGCRFSFPSKPISTSNLIVVRR-RTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP
        P+SSSS    + +    F      F    I+     + R+ R    VV MAPEEEK+TRRNPLDFPI +    P
Subjt:  PISSSS----STTHSCCFGGCRFSFPSKPISTSNLIVVRR-RTGRHVVRMAPEEEKITRRNPLDFPIVFPATVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGAGAGTAGAATCTTGGCAATCGGAGTGGGTGTCGGGGGAATCCGAGAGTGGTGGCCCACTTCCATGCGCGGTGACCATCTCCAAGTCACAGCCAAATCTCAG
CCATTGGATTCCTCATTCTTGGATCATCCTTGTCATCCCCTTCTTCCACGTAGCCTCGAATGAACGCATTCAATTAATTGGAATTGAATTGAACAGAGTGGCGTGGTTCG
TGTTCGGAGATTCAGTTAGACCCTACCCGTTACCTCTGGGGGAGAGGAAGATCATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTAT
CTACCAATATCCTCTTCATCTTCTACTACCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAAG
GAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGTTTTTCCTGCAACTGTACCTCTCTGCTTGT
TTCGGCTATATTTCATGAGAATGGGCCATAATTTGTTGCCTGGATATTTTGACCTCATATTTGTGATAGTTCTTGTAGATTGTATTGCACTGGGAGTGGGAGAGGCCAAA
GCCAGGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGAGAGTAGAATCTTGGCAATCGGAGTGGGTGTCGGGGGAATCCGAGAGTGGTGGCCCACTTCCATGCGCGGTGACCATCTCCAAGTCACAGCCAAATCTCAG
CCATTGGATTCCTCATTCTTGGATCATCCTTGTCATCCCCTTCTTCCACGTAGCCTCGAATGAACGCATTCAATTAATTGGAATTGAATTGAACAGAGTGGCGTGGTTCG
TGTTCGGAGATTCAGTTAGACCCTACCCGTTACCTCTGGGGGAGAGGAAGATCATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTAT
CTACCAATATCCTCTTCATCTTCTACTACCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAAG
GAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGTTTTTCCTGCAACTGTACCTCTCTGCTTGT
TTCGGCTATATTTCATGAGAATGGGCCATAATTTGTTGCCTGGATATTTTGACCTCATATTTGTGATAGTTCTTGTAGATTGTATTGCACTGGGAGTGGGAGAGGCCAAA
GCCAGGGCGTAG
Protein sequenceShow/hide protein sequence
MKGRVESWQSEWVSGESESGGPLPCAVTISKSQPNLSHWIPHSWIILVIPFFHVASNERIQLIGIELNRVAWFVFGDSVRPYPLPLGERKIMASICLLSSKTLVLPSAAY
LPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIVFPATVPLCLFRLYFMRMGHNLLPGYFDLIFVIVLVDCIALGVGEAK
ARA