; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G006780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G006780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontransmembrane protein 234 homolog
Genome locationCmo_Chr10:3102153..3102551
RNA-Seq ExpressionCmoCh10G006780
SyntenyCmoCh10G006780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018908 - Putative transmembrane family 234


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023602.1 Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-6299.24Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_022961299.1 transmembrane protein 234 homolog [Cucurbita moschata]6.7e-63100Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_022987899.1 transmembrane protein 234 homolog [Cucurbita maxima]5.7e-6298.48Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]3.3e-6298.48Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYT+PFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_038879672.1 transmembrane protein 234 homolog [Benincasa hispida]2.5e-5792.42Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T    KLLSSLRRWLKLLSIWQYT+PFL+NLTASATFFAILSDAPISLAVP+TNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

TrEMBL top hitse value%identityAlignment
A0A0A0LT65 Uncharacterized protein5.8e-5285.61Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIWQYT+PF +NLTASATFF ILS APISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGE TRVGYALFGT LIG GVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A1S4E4M5 transmembrane protein 234 homolog1.8e-5387.12Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFG+LLGE+TRVGYALFGTALIG GVWLCI+
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A5A7VAD4 Transmembrane protein 234-like protein1.8e-5387.12Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFG+LLGE+TRVGYALFGTALIG GVWLCI+
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A6J1HBE7 transmembrane protein 234 homolog3.3e-63100Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A6J1JK46 transmembrane protein 234 homolog2.8e-6298.48Show/hide
Query:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

SwissProt top hitse value%identityAlignment
A0NGI1 Transmembrane protein 234 homolog8.4e-0832.56Show/hide
Query:  VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLK---LLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATA
        V  ++ + I+WGATN  ++RG++ +++ LK+ S         L  L  WL+   L++ WQY +P ++N   S  +   L    +SL VP+ N+ TF  TA
Subjt:  VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLK---LLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATA

Query:  VFGMLLGEETRVGYALFGTALIGLGVWLC
        +   LLGE         G  L+ LG  +C
Subjt:  VFGMLLGEETRVGYALFGTALIGLGVWLC

Q54ZG7 Transmembrane protein 234 homolog1.6e-1131.78Show/hide
Query:  DVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVF
        ++  ++ +G +WG TN L++RG+           +  +  N L   +  ++ L +   YT+P L+NL+ S  FF  LS   ISL VP++N+ TF  T++ 
Subjt:  DVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVF

Query:  GMLLGEETRVGYALFGTALIGLGVWLCIN
        GMLLGE+     +  G   +  GV +C++
Subjt:  GMLLGEETRVGYALFGTALIGLGVWLCIN

Q8R1E7 Transmembrane protein 2343.0e-0527.13Show/hide
Query:  GDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAV
        G V  +V +  +WG T  L++R +        S     R        L+    L    +Y +PFL+N + S  ++  L+   ++LAVP+ N+     T +
Subjt:  GDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAV

Query:  FGMLLGEETRVGYALFGTALIGLGVWLCI
         G +LGE+     A+ G  L   G+ +CI
Subjt:  FGMLLGEETRVGYALFGTALIGLGVWLCI

Arabidopsis top hitse value%identityAlignment
AT5G19570.1 unknown protein3.1e-4263.16Show/hide
Query:  DVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRS-----SNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFA
        D++KMVA+G+VWGATNAL+RRGAL WD+   SS+  + S       K++ +LR W+ LL  WQY++PFL+NL+ASATFFA+LS APISLAVPVTNATTFA
Subjt:  DVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRS-----SNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFA

Query:  ATAVFGMLLGEETRVGYALFGTALIGLGVWLCI
        ATA FG+LLGEET++G AL GT+ I  G+WLC+
Subjt:  ATAVFGMLLGEETRVGYALFGTALIGLGVWLCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGGGATGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTC
CAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAG
CTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTCACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAA
ACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGGGATGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTC
CAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAG
CTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTCACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAA
ACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA
Protein sequenceShow/hide protein sequence
MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEE
TRVGYALFGTALIGLGVWLCIN