; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G007770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G007770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCmo_Chr10:3615598..3616143
RNA-Seq ExpressionCmoCh10G007770
SyntenyCmoCh10G007770
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590024.1 RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia]6.3e-9698.91Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAA--AAA
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAA  AAA
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAA--AAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_022960602.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata]2.0e-97100Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_022987479.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]4.3e-9296.13Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
        MSDSASN+F+QPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS AAAA EE
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EGNGNECVVCLSAFEEGEEVKKLPRC+HMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_023516728.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita pepo subsp. pepo]2.9e-9396.2Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--
        MSDSASNYFAQPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA  
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--

Query:  -EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
         EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  -EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_038879803.1 RING-H2 finger protein ATL39-like [Benincasa hispida]1.3e-7280.77Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAE
        MSDS+S  FAQPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAGSYAEM+NSSRS  SS    LCSFKFKKGS  AAAAAE
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAE

Query:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEG GNEC VCLSAFE+G+EVKKLPRC HMFHA CIDMWLFSH DCPLCRAPV   GLS+ Q  AEQ+ NSGHGL ESG LV
Subjt:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

TrEMBL top hitse value%identityAlignment
A0A6J1D0Z7 RING-type E3 ubiquitin transferase9.3e-6978.02Show/hide
Query:  SDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAEE
        S S+S  F QPT HPAKSSLPMLYYGLVV+GTAAIVLV+YNFIVI WCSD RRGR SP +A SYAEM++SS S QSS+RNLL SF+FKKG+ AAAA AEE
Subjt:  SDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTAAEQQGNSGHGLPESGGLV
        EGNG EC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVA+ PGL +  TAAEQ  NSGHGL ESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTAAEQQGNSGHGLPESGGLV

A0A6J1EGS5 RING-type E3 ubiquitin transferase2.5e-6679.64Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--
        M DSAS + AQPTSHPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSD+  G+AS ALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A AAA  
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--

Query:  --EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTA
          EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPV  P L +R TA
Subjt:  --EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTA

A0A6J1H7W2 RING-type E3 ubiquitin transferase9.5e-98100Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

A0A6J1HZG2 RING-type E3 ubiquitin transferase1.4e-7279.03Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--
        M DSAS + AQPTSHPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSDN  G+ASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A A A  
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA--

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV
        EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAP   P L +R T   AAEQQ NSGHGL ES  LV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV

A0A6J1JJ05 RING-type E3 ubiquitin transferase2.1e-9296.13Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE
        MSDSASN+F+QPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS AAAA EE
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EGNGNECVVCLSAFEEGEEVKKLPRC+HMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

SwissProt top hitse value%identityAlignment
P0C041 Putative RING-H2 finger protein ATL532.7e-1233.54Show/hide
Query:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNL-------LCSFKFKKGSAAAAA
        S+P  S L +  +G   I   A +L  Y  +V  +C+++    A+     S   + VNS          +L+SS   L       +  FK KK       
Subjt:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNL-------LCSFKFKKGSAAAAA

Query:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
             NG +C +CL  F E E ++ LP+C H FH  CID WL SH +CPLCRA + VP
Subjt:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

P93823 RING-H2 finger protein ATL13.3e-1534.21Show/hide
Query:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEE
        P +  + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S   P +  S  E+   +R L  S    +  FKFKK    A   ++ 
Subjt:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEE

Query:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
         N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

Q9LF64 RING-H2 finger protein ATL526.7e-1632.42Show/hide
Query:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA
        ++F    S  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA

Query:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH
             +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +     A  Q NS H
Subjt:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH

Q9LRB7 E3 ubiquitin-protein ligase EL51.2e-1535.84Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSN------------RNLLCS
        M +S+S+    P S PA     M   G+  +    IV   L L   ++  +C + RR   + + +G         RS    +            R+L  +
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSN------------RNLLCS

Query:  FKFKKGSAAAAAAEEE---GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
          + + +AAAAA EEE    +G EC VCL+  E+GEE + LPRC H FHA C+DMWL SH  CPLCR  V VP
Subjt:  FKFKKGSAAAAAAEEE---GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

Q9LSW9 RING-H2 finger protein ATL162.7e-1234.34Show/hide
Query:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG---
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +  S  E+   SR L  S    +  FKFKK    
Subjt:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG---

Query:  ----SAAAAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  ----SAAAAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein2.4e-1634.21Show/hide
Query:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEE
        P +  + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S   P +  S  E+   +R L  S    +  FKFKK    A   ++ 
Subjt:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEE

Query:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
         N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

AT4G17905.1 RING/U-box superfamily protein1.9e-1333.54Show/hide
Query:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNL-------LCSFKFKKGSAAAAA
        S+P  S L +  +G   I   A +L  Y  +V  +C+++    A+     S   + VNS          +L+SS   L       +  FK KK       
Subjt:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNL-------LCSFKFKKGSAAAAA

Query:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
             NG +C +CL  F E E ++ LP+C H FH  CID WL SH +CPLCRA + VP
Subjt:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

AT4G33565.1 RING/U-box superfamily protein1.1e-1361.22Show/hide
Query:  GNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPV
        G +C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRAP+
Subjt:  GNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPV

AT5G17600.1 RING/U-box superfamily protein4.8e-1732.42Show/hide
Query:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA
        ++F    S  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA

Query:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH
             +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +     A  Q NS H
Subjt:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH

AT5G43420.1 RING/U-box superfamily protein1.9e-1334.34Show/hide
Query:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG---
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +  S  E+   SR L  S    +  FKFKK    
Subjt:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG---

Query:  ----SAAAAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  ----SAAAAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATTCTGCTTCAAATTATTTTGCTCAACCAACGTCTCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTAATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAGTTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCGAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGGCGGCCGAAGAAGAAGGGAATGGGAATGAATGTGTGGTTTGT
TTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTTGTTGTATAGATATGTGGCTTTTTTCTCACTGTGATTGCCCCCT
CTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGCGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATTCTGCTTCAAATTATTTTGCTCAACCAACGTCTCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTAATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAGTTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCGAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGGCGGCCGAAGAAGAAGGGAATGGGAATGAATGTGTGGTTTGT
TTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTTGTTGTATAGATATGTGGCTTTTTTCTCACTGTGATTGCCCCCT
CTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGCGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGGTTTGA
Protein sequenceShow/hide protein sequence
MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEEGNGNECVVC
LSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV