; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G008140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G008140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:3792046..3796101
RNA-Seq ExpressionCmoCh10G008140
SyntenyCmoCh10G008140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590052.1 20 kDa chaperonin, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.0e-13099.59Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRN GNEEVPNTRAASPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL

KAG7023718.1 hypothetical protein SDJN02_14744 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-130100Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL

XP_008450957.1 PREDICTED: uncharacterized protein LOC103492393 isoform X1 [Cucumis melo]7.0e-11485.26Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSLLLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT
        YKVTRPVPFPCFGVLKKEKHVLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+DMR+DG        EEV NT
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT

Query:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        + ASPSKSLKYDPY YSGE+VLQKVDEVGSSVKR+QALIEEQRSQ SN L+
Subjt:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

XP_022961184.1 uncharacterized protein LOC111461774 [Cucurbita moschata]4.8e-131100Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

XP_022988300.1 uncharacterized protein LOC111485590 [Cucurbita maxima]1.5e-12998.77Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDG+EEVPNTR  SPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

TrEMBL top hitse value%identityAlignment
A0A1S4DY63 uncharacterized protein LOC103492393 isoform X13.4e-11485.26Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSLLLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT
        YKVTRPVPFPCFGVLKKEKHVLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+DMR+DG        EEV NT
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT

Query:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        + ASPSKSLKYDPY YSGE+VLQKVDEVGSSVKR+QALIEEQRSQ SN L+
Subjt:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

A0A5A7UQB8 Uncharacterized protein3.4e-11485.26Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSLLLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT
        YKVTRPVPFPCFGVLKKEKHVLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+DMR+DG        EEV NT
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT

Query:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        + ASPSKSLKYDPY YSGE+VLQKVDEVGSSVKR+QALIEEQRSQ SN L+
Subjt:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

A0A6J1D1K1 uncharacterized protein LOC1110164395.0e-11084Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSD E VEIS+LERGLLSEC+SDLEPE DD+PVL+AASFQEME++FVKY+TAQWVLYSLLLI AWGIGLLMLLYLP+RRY+LRKDIQSKKLYLTPN+II
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT
        YKVTRPV FPCFGVLKKEKHVLLPSVA IIVEQGYLQS YGVYSLRIEN G+RRPP DDVQIQG+TDPIAFKKAV MRLS MRNDG        EE PNT
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGN-------EEVPNT

Query:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL
        R ASPSKS KYDPY YSGE VLQKV+EVGSSVKR+Q LIEEQRSQ SNPL
Subjt:  RAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPL

A0A6J1HDA7 uncharacterized protein LOC1114617742.3e-131100Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

A0A6J1JJ70 uncharacterized protein LOC1114855907.5e-13098.77Show/hide
Query:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
        MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII
Subjt:  MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSII

Query:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK
        YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDG+EEVPNTR  SPSK
Subjt:  YKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSK

Query:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
        SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE
Subjt:  SLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCAGACGTGGAGGCTGTGGAAATTAGTAACTTGGAAAGGGGTCTATTGTCTGAATGCAATTCTGATTTGGAACCTGAAATCGACGATGAGCCCGTGTTGTTTGC
AGCTTCCTTCCAAGAGATGGAAGACAGCTTTGTTAAGTATCATACAGCACAATGGGTCCTTTACTCCTTGCTTTTGATTTTAGCGTGGGGGATTGGGTTGTTGATGCTGC
TTTATCTACCAATAAGACGATACGTTCTGCGAAAAGATATTCAATCGAAGAAGCTTTATCTTACACCAAATTCTATAATCTACAAGGTTACAAGACCTGTACCTTTTCCA
TGTTTTGGAGTATTGAAGAAAGAGAAGCATGTTTTGTTGCCTTCAGTGGCAGACATTATAGTTGAACAAGGATATCTACAGTCTCTCTATGGAGTTTACTCTCTTAGGAT
AGAGAATGCTGGCCTGAGAAGACCACCTGGTGATGACGTTCAAATTCAAGGAGTTACAGACCCAATTGCATTTAAAAAGGCTGTTCTAATGCGTCTCTCTGATATGAGGA
ATGATGGCAATGAAGAAGTTCCAAATACAAGGGCGGCATCTCCATCGAAATCTCTAAAGTACGACCCGTACTTCTATTCGGGGGAACGAGTACTTCAGAAAGTAGATGAG
GTTGGAAGCTCTGTGAAGAGAATTCAAGCTTTGATTGAAGAACAACGGTCTCAAGCATCTAACCCTTTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ACTTCTCTGATCGGACTTTCTTTTCCACTGTCCTCTCTGAGTTAGGATCGACGTTCGCCGTTTTCTTCCTCCGACGGCCACATCGAGCCAGCGCCTTCCCTCCCTTTGCT
TTCTCTGCTCCCGATTGCCGAACTGTCCAATTTCTCCAACGATTTTTCTCTCGTTTGATCGATTTCCAAGTCGCGGGGCTTTCCAGTTTCCAATTGAAACAGGATTTGCT
TATTATTATCGCTTAGATGGGTTCAGACGTGGAGGCTGTGGAAATTAGTAACTTGGAAAGGGGTCTATTGTCTGAATGCAATTCTGATTTGGAACCTGAAATCGACGATG
AGCCCGTGTTGTTTGCAGCTTCCTTCCAAGAGATGGAAGACAGCTTTGTTAAGTATCATACAGCACAATGGGTCCTTTACTCCTTGCTTTTGATTTTAGCGTGGGGGATT
GGGTTGTTGATGCTGCTTTATCTACCAATAAGACGATACGTTCTGCGAAAAGATATTCAATCGAAGAAGCTTTATCTTACACCAAATTCTATAATCTACAAGGTTACAAG
ACCTGTACCTTTTCCATGTTTTGGAGTATTGAAGAAAGAGAAGCATGTTTTGTTGCCTTCAGTGGCAGACATTATAGTTGAACAAGGATATCTACAGTCTCTCTATGGAG
TTTACTCTCTTAGGATAGAGAATGCTGGCCTGAGAAGACCACCTGGTGATGACGTTCAAATTCAAGGAGTTACAGACCCAATTGCATTTAAAAAGGCTGTTCTAATGCGT
CTCTCTGATATGAGGAATGATGGCAATGAAGAAGTTCCAAATACAAGGGCGGCATCTCCATCGAAATCTCTAAAGTACGACCCGTACTTCTATTCGGGGGAACGAGTACT
TCAGAAAGTAGATGAGGTTGGAAGCTCTGTGAAGAGAATTCAAGCTTTGATTGAAGAACAACGGTCTCAAGCATCTAACCCTTTAGAATGA
Protein sequenceShow/hide protein sequence
MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFP
CFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDE
VGSSVKRIQALIEEQRSQASNPLE