CuGenDBv2

Gene ID	CmoCh10G008510
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Ribosomal RNA small subunit methyltransferase A
Genome location	Cmo_Chr10:4026529..4030163
RNA-Seq Expression	CmoCh10G008510
Synteny	CmoCh10G008510
Gene Ontology terms	GO:0032259 - methylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6590086.1 hypothetical protein SDJN03_15509, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-177

98.1

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI
        MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD    AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI

Query:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
        NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
Subjt:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE

Query:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
        RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
Subjt:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM

Query:  NLGLEYLGKRTHDILV
        NLGLEYLGKRTHD L+
Subjt:  NLGLEYLGKRTHDILV

XP_004142555.1 uncharacterized protein LOC101219568 [Cucumis sativus]

1.0e-165

91.03

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSS+SPKGIV+TFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA  GA I DGVLTNK+DVDW+KDQIKANGLQMH+NVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEG ++QNRTALPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITP+AHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDM+FNKFGSEVLYDLIYASAVFLH+PDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

XP_022961141.1 uncharacterized protein LOC111461742 [Cucurbita moschata]

2.1e-179

99.36

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

XP_022987105.1 uncharacterized protein LOC111484758 [Cucurbita maxima]

3.4e-177

97.78

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI
        MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD    AGAQIRDGVLTN+EDVDWVKDQIKANGLQMHDNVLRKGI
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI

Query:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
        NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
Subjt:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE

Query:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
        RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
Subjt:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM

Query:  NLGLEYLGKRTHDILV
        NLGLEYLGKRTHD L+
Subjt:  NLGLEYLGKRTHDILV

XP_023516022.1 uncharacterized protein LOC111780012 [Cucurbita pepo subsp. pepo]

1.8e-175

96.54

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADA------GAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRK
        MALWSSSSSPKGIVVTFPVLLLSAF+VILFCFFFISNFSSCPCPVSPHIVVSSIAA A      GAQI DGVLTNKEDVDWVKDQIKANGLQMHDNVLRK
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADA------GAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRK

Query:  GINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHC
        GINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHC
Subjt:  GINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHC

Query:  LERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKR
        LERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKR
Subjt:  LERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKR

Query:  LMNLGLEYLGKRTHDILV
        LMNLGLEYLGKRTHD L+
Subjt:  LMNLGLEYLGKRTHDILV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M070 Uncharacterized protein

4.9e-166

91.03

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSS+SPKGIV+TFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA  GA I DGVLTNK+DVDW+KDQIKANGLQMH+NVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEG ++QNRTALPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITP+AHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDM+FNKFGSEVLYDLIYASAVFLH+PDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

A0A1S3B9G2 uncharacterized protein LOC103487243

2.1e-164

90.38

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSSSSPKGIVVTFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA+ G  I +GVLTNK+DV+WVKDQIKANGLQMH+NVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEG ++QNRTA PCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITPDAHVLEIGCGTLRVGLHFIRYL+RGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDM+F+KFGSEV YDLIYASAVFLHMPDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

A0A5D3D8G7 Ribosomal RNA small subunit methyltransferase A

2.1e-164

90.38

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Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSSSSPKGIVVTFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA+ G  I +GVLTNK+DV+WVKDQIKANGLQMH+NVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEG ++QNRTA PCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITPDAHVLEIGCGTLRVGLHFIRYL+RGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDM+F+KFGSEV YDLIYASAVFLHMPDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

A0A6J1H9D1 uncharacterized protein LOC111461742

1.0e-179

99.36

Show/hide

Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
        MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRT

Query:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
        RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL
Subjt:  RAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDEL

Query:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
        SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
Subjt:  SMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL

Query:  EYLGKRTHDILV
        EYLGKRTHD L+
Subjt:  EYLGKRTHDILV

A0A6J1JFW2 uncharacterized protein LOC111484758

1.6e-177

97.78

Show/hide

Query:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI
        MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD    AGAQIRDGVLTN+EDVDWVKDQIKANGLQMHDNVLRKGI
Subjt:  MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD----AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGI

Query:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
        NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE
Subjt:  NPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLE

Query:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
        RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
Subjt:  RDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM

Query:  NLGLEYLGKRTHDILV
        NLGLEYLGKRTHD L+
Subjt:  NLGLEYLGKRTHDILV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

3.3e-122

66.36

Show/hide

Query:  MALWSSSSSP---KGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCP----VSPHIVVSSIAADAGAQIR--DGVLTNKEDVDWVKDQIKANGLQMHDNV
        MA  SSSSSP   KGI V+ PVL+L+   V    F   S+FSSC CP     SP   V +    +G  +R  D +   ++D++WV+D I++NGL M  N 
Subjt:  MALWSSSSSP---KGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCP----VSPHIVVSSIAADAGAQIR--DGVLTNKEDVDWVKDQIKANGLQMHDNV

Query:  LRKGINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGH
        LRKGINPRTR QQL DL Q+KGISHYEG +  N TALPCPGELLVE+HHSNYGEPWAGGRDVFE+LAE S + P++ VLEIGCGTLRVGLHFIRYL   H
Subjt:  LRKGINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGH

Query:  YHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEEC
        +HCLE+DELS+MAA RYELPSQGLL KRPLIV+G+DM+F+KFGS+  YDLIYASAVFLHMPDKLVW GLERL ++LKPYDGRIFVSHN+KFCSRLG ++C
Subjt:  YHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEEC

Query:  TKRLMNLGLEYLGKRTHDILV
        +++L +LGLEYLGK+THD L+
Subjt:  TKRLMNLGLEYLGKRTHDILV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCTGTGGTCCTCATCATCGTCTCCGAAAGGGATTGTCGTGACATTTCCGGTGCTCTTACTCAGTGCCTTCGCTGTGATTCTCTTTTGCTTCTTCTTTATCTCCAA
TTTCTCCTCTTGTCCATGCCCTGTTTCTCCCCACATTGTTGTCTCCAGTATTGCTGCCGACGCCGGAGCCCAGATTCGTGATGGGGTTCTGACAAACAAAGAAGATGTTG
ATTGGGTGAAGGATCAGATCAAAGCTAATGGGTTGCAGATGCATGATAATGTGCTCCGAAAAGGCATCAACCCTCGCACTAGGGCTCAACAACTTGAAGATCTCAGACAG
TTCAAGGGTATATCACATTATGAGGGATCCGACGAACAGAACCGAACAGCACTGCCATGCCCTGGTGAGCTCCTGGTAGAAGAACACCATAGTAACTATGGTGAACCTTG
GGCAGGCGGGCGAGATGTGTTTGAGTACCTAGCTGAGTTCTCTCATATAACGCCGGATGCACACGTTTTGGAGATTGGGTGTGGCACTCTACGAGTTGGCTTGCATTTCA
TACGATACCTTAAGCGTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTATGATGGCTGCCTTTAGGTATGAGCTTCCATCTCAAGGTCTCTTAAGCAAGCGCCCA
TTAATTGTGAAAGGAGAGGACATGGACTTCAATAAGTTTGGCTCTGAAGTTCTTTATGATTTGATATATGCTAGTGCTGTGTTCCTTCATATGCCTGATAAGCTTGTCTG
GGTTGGACTAGAGAGGCTTGCTAACAAATTAAAGCCATACGATGGACGAATCTTTGTGTCCCATAACATAAAGTTCTGTTCACGGTTGGGCGGGGAGGAATGTACAAAGC
GTCTAATGAACTTAGGACTTGAGTATCTAGGAAAGCGCACACACGATATCTTGGTGGATGAGAATGCCATTGACACTTTCAGCTCCTTGACTGGTTTTATGGAGAATCCA
GGAGAAATTGGCCAACCCTTGAGCATGACGCACAAGGCGACGTCTCGTCGCAAACCCAGTTCATCACGTAACCGCGGCAAGTCTACGAAGGCCAATAACTCTGTGGGTTC
CCTTCAATCTTCAAAGTTTCTTCACATTCCCATCTCTTTTCTTCATCTTCCCAGATCTTCTTCTGGGAAACCACTGCAGCATTTCGAGTTCATTCTAAAGCACAATTCGT
TATACCATCCTTTGCTTGAGTTGCAAGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQ
FKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRP
LIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGLEYLGKRTHDILVDENAIDTFSSLTGFMENP
GEIGQPLSMTHKATSRRKPSSSRNRGKSTKANNSVGSLQSSKFLHIPISFLHLPRSSSGKPLQHFEFILKHNSLYHPLLELQD

CmoCh10G008510 (gene) of Cucurbita moschata (Rifu) v1 genome