; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G009080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G009080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr10:4497381..4498937
RNA-Seq ExpressionCmoCh10G009080
SyntenyCmoCh10G009080
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153224.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica charantia]7.7e-14693.04Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR RFG +P  GSS K ASFVVRAEATPPVKQGANR LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGR+AMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLE+FLGGSG+PAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

XP_022960627.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita moschata]4.1e-155100Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

XP_022988182.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita maxima]1.2e-15197.8Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MAT+ALVSSSLTSS GAARQRFG KPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSM DLKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHLSDP+NNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

XP_023515627.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita pepo subsp. pepo]6.5e-15398.9Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRFG KPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGVVGAIAPEILGSLGLIP ETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG+ERFLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]1.3e-14593.41Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQR G KP  GSS K ASFVVRAEATPPVKQGA+R LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+FLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic4.1e-14592.67Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQR G +P  GSS K ASFVVRAEATPPVKQGA+R LWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+FLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

A0A6J1DIF2 Chlorophyll a-b binding protein, chloroplastic3.7e-14693.04Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR RFG +P  GSS K ASFVVRAEATPPVKQGANR LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGR+AMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLE+FLGGSG+PAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

A0A6J1H7Y6 Chlorophyll a-b binding protein, chloroplastic2.0e-155100Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

A0A6J1JLI6 Chlorophyll a-b binding protein, chloroplastic6.0e-15297.8Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MAT+ALVSSSLTSS GAARQRFG KPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSM DLKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHLSDP+NNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

A0A6J1KV56 Chlorophyll a-b binding protein, chloroplastic7.0e-14593.07Show/hide
Query:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQR GPKP LGSS K ASFVVRAEATPPVKQGANR LWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA
        EVINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDW  PGSMGKQYFLGLE+FLGGSGDPA
Subjt:  EVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        YPGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic5.4e-4141.04Show/hide
Query:  SSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGV
        S VGA +  F     L  S   A    R+ A   V    +R LWF       +LDGSLPGD+GFDPLGL SDPE        +W A  E+++ R+AMLG 
Subjt:  SSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGV

Query:  VGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGF
         G   PE L  +G++   +   W+       AG   Y+ D  TLFV+E+ L+G+AE RR+ D  KPG +         +  G   D  YPGG  F+PLG+
Subjt:  VGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGF

Query:  GKDEKS-MKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDP
        G    + +K+L+ KE+KNGRLAMLA++G + Q + TG GP  NL  HL+DP
Subjt:  GKDEKS-MKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDP

P27522 Chlorophyll a-b binding protein 8, chloroplastic3.0e-13285.04Show/hide
Query:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQAL+ SSS+++S  AARQ  G +    S T++ASFVVRA +TPPVKQGANR LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA
        EVINGRFAMLG  GAIAPEILG  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+ LGGSGDPA
Subjt:  EVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        YPGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQ LVTGVGPYQNLLDHL+DP+NNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic2.2e-12782.91Show/hide
Query:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ-GANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAY
        MATQALV SSSLT +  A RQ F  +    S       +VRA ATPPVKQ G +R LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAY
Subjt:  MATQALV-SSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ-GANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAY

Query:  GEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDP
        GEVINGRFAMLG VGAIAPE LG +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+  GGSG+P
Subjt:  GEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDP

Query:  AYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        AYPGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDH++DP+NNN+LTSLKFH
Subjt:  AYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic4.7e-4545.05Show/hide
Query:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA
        RA W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A
Subjt:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA

Query:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV
           TL V++  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  
Subjt:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV

Query:  GPYQNLLDHLSDPINNNLLTSL
        GP  NL++HLS+P +  ++ +L
Subjt:  GPYQNLLDHLSDPINNNLLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic3.7e-13585.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ FG KP   +S K++SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 53.3e-4645.05Show/hide
Query:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA
        RA W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A
Subjt:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA

Query:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV
           TL V++  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  
Subjt:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV

Query:  GPYQNLLDHLSDPINNNLLTSL
        GP  NL++HLS+P +  ++ +L
Subjt:  GPYQNLLDHLSDPINNNLLTSL

AT1G45474.2 photosystem I light harvesting complex gene 53.3e-4645.05Show/hide
Query:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA
        RA W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A
Subjt:  RALWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWA

Query:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV
           TL V++  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  
Subjt:  DPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGV

Query:  GPYQNLLDHLSDPINNNLLTSL
        GP  NL++HLS+P +  ++ +L
Subjt:  GPYQNLLDHLSDPINNNLLTSL

AT1G61520.1 photosystem I light harvesting complex gene 32.7e-13685.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ FG KP   +S K++SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 34.0e-10888.78Show/hide
Query:  SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEH
        SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEH
Subjt:  SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEH

Query:  RRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLT
        RR QDW  PGSMGKQYFLGLE+ L GSG+PAYPGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHL+DP+NNN+LT
Subjt:  RRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLT

Query:  SLKFH
        SLKFH
Subjt:  SLKFH

AT1G61520.3 photosystem I light harvesting complex gene 32.7e-13685.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ FG KP   +S K++SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLLDHL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCTCGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTT
TGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAGGAGCCAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGTCTCCCAGGCGATT
ACGGGTTCGACCCACTAGGGCTATCGGACCCTGAAGGCACGGGAGGGTTCATCGAGCCAAGATGGTTAGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGA
GTAGTAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAGGGCTAATCCCACCGGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAA
CTATTGGGCAGACCCCTACACACTATTTGTACTTGAAATGGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGT
ACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGAT
TTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGGACCA
TTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTTAAATTTCACTAG
mRNA sequenceShow/hide mRNA sequence
TATCATTCCTATTCTTCCTCTCACATCACTCCCCACCAACCCCTTCTCCCCTTCCCTCTCAAACAAAGCCATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCT
CGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAGGA
GCCAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGTCTCCCAGGCGATTACGGGTTCGACCCACTAGGGCTATCGGACCCTGAAGGCAC
GGGAGGGTTCATCGAGCCAAGATGGTTAGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAGTAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAG
GGCTAATCCCACCGGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAATG
GCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGGA
CCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGT
TGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTT
AAATTTCACTAGATTTGTAAGTGATATCGGTCGATGCTTCTTGTTTTGTTAGTAGATAATGAACTAATCATTGAAAAGTACTTATACGAATGGAACGATGGGTCTGATTA
GAAAAAAGTTATGATATATAAGTTAAAAGATGATGGGAATGTTGACAAGTATCTTGAATTGCGTGCCCTAAAAACTAAGGGTGCAAGGTGGTCAAGGTGGGAGACCGGTA
GGACAGAGTCGAATGGGGGAGTCATGTGGGTGTGGTTCTTGTTTCGCTAGTTGTTTACACAATTTAAGGCTATTTTAATGAAAAAAATATATTTCTCGAGCTAAACAATC
TCAAGTTAAACAACTCTTATTATCTAAGAAT
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLG
VVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKD
LKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH