; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G009160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G009160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIQ domain-containing protein IQM2-like
Genome locationCmo_Chr10:4541273..4544063
RNA-Seq ExpressionCmoCh10G009160
SyntenyCmoCh10G009160
Gene Ontology termsGO:0000972 - transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery (biological process)
GO:0006405 - RNA export from nucleus (biological process)
GO:0006606 - protein import into nucleus (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044611 - nuclear pore inner ring (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR044159 - IQ domain-containing protein IQM


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590148.1 IQ domain-containing protein IQM2, partial [Cucurbita argyrosperma subsp. sororia]5.9e-7299.32Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

KAG7023815.1 IQ domain-containing protein IQM2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-7198.65Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEP+VMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

XP_022961094.1 IQ domain-containing protein IQM2-like [Cucurbita moschata]2.0e-72100Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

XP_022988057.1 IQ domain-containing protein IQM2-like [Cucurbita maxima]9.4e-7096.62Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENL VVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PR ECRD DE+KTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

XP_023516557.1 IQ domain-containing protein IQM2-like [Cucurbita pepo subsp. pepo]5.9e-7299.32Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

TrEMBL top hitse value%identityAlignment
A0A0A0M0B9 Uncharacterized protein3.4e-5781.25Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVS-------LEENLLVVADSPKS
        MGAFFSCPLAKYIDVENGLES+TVKSISFGDD+VKTPVRSISFNSRDLEPM+MKSVGSG+MTLE SVSFKRRELEK+VS       LE+ LLVVADSPKS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVS-------LEENLLVVADSPKS

Query:  KEMEIQSPRSECRDRDEIKTT-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        K ME QSPRSE  + D IK T     TN KH+AAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  KEMEIQSPRSECRDRDEIKTT-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

A0A1S3BNY0 IQ domain-containing protein IQM2-like4.7e-5982.5Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVS-------LEENLLVVADSPKS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPM+MKSVGSG+M+LE SVSFKRRELEKMVS       LE+ LLVVA SPKS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVS-------LEENLLVVADSPKS

Query:  KEMEIQSPRSECRDRDEIKTT-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        KEME QSPRS   D D IK T     TN KHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  KEMEIQSPRSECRDRDEIKTT-----TNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

A0A6J1DIB2 IQ domain-containing protein IQM2-like5.0e-5376.25Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSL-------EENLLVVADSPKS
        MGAFFSCP A+Y+DVENGLESITVKSISFGDD+VKTPVRS+SFN RDLEPM+MKSVGSG+M LE SVSFK RELEKMVS+       EE L VVA SPKS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSL-------EENLLVVADSPKS

Query:  KEM--EIQSPRSECRDRDEIKT---TTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        KEM  EIQSPRSE  D  +  T    TN +H+AAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  KEM--EIQSPRSECRDRDEIKT---TTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

A0A6J1HCZ6 IQ domain-containing protein IQM2-like9.7e-73100Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

A0A6J1JC14 IQ domain-containing protein IQM2-like4.5e-7096.62Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS
        MGAFFSCPLAKYIDVENGLESITVKSISFGDD+VKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENL VVADSPKSKEMEIQS
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQS

Query:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        PR ECRD DE+KTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  PRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

SwissProt top hitse value%identityAlignment
O64851 IQ domain-containing protein IQM49.3e-0477.78Show/hide
Query:  AAMKLQKVYKSFRTRRKLADCAVLVEQ
        AA  LQKVYKS+RTRR LADCAV+VE+
Subjt:  AAMKLQKVYKSFRTRRKLADCAVLVEQ

Q058N0 IQ domain-containing protein IQM55.4e-0477.78Show/hide
Query:  AAMKLQKVYKSFRTRRKLADCAVLVEQ
        AA+ LQKVYKS+RTRR LADCAV+VE+
Subjt:  AAMKLQKVYKSFRTRRKLADCAVLVEQ

Q9LHN9 IQ domain-containing protein IQM24.3e-3356.29Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEME
        MG  FSCP A+  DVE  L+S+TVKSISFG DD+ KTP RS++FN   LEP ++KS+GSGKM +E SVS K  +LE+M+SL  +   V D+    +KE  
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEME

Query:  IQSPRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        +  PR             N KH AA+KLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  IQSPRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

Q9M2G8 IQ domain-containing protein IQM64.0e-0736.59Show/hide
Query:  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LVVADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMK
        + KT +RSISFN  D +  + +S  + K     S+S K  +  ++    +E N     L         +M I  P  E     E       +  + AA+K
Subjt:  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LVVADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMK

Query:  LQKVYKSFRTRRKLADCAVLVEQ
        LQKVY+SFRTRR+LADCAV+VEQ
Subjt:  LQKVYKSFRTRRKLADCAVLVEQ

Arabidopsis top hitse value%identityAlignment
AT2G26190.1 calmodulin-binding family protein6.6e-0577.78Show/hide
Query:  AAMKLQKVYKSFRTRRKLADCAVLVEQ
        AA  LQKVYKS+RTRR LADCAV+VE+
Subjt:  AAMKLQKVYKSFRTRRKLADCAVLVEQ

AT3G13600.1 calmodulin-binding family protein3.0e-3456.29Show/hide
Query:  MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEME
        MG  FSCP A+  DVE  L+S+TVKSISFG DD+ KTP RS++FN   LEP ++KS+GSGKM +E SVS K  +LE+M+SL  +   V D+    +KE  
Subjt:  MGAFFSCPLAKYIDVENGLESITVKSISFG-DDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADS--PKSKEME

Query:  IQSPRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS
        +  PR             N KH AA+KLQKVYKSFRTRRKLADCAVLVEQS
Subjt:  IQSPRSECRDRDEIKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQS

AT3G58480.1 calmodulin-binding family protein2.9e-0836.59Show/hide
Query:  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LVVADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMK
        + KT +RSISFN  D +  + +S  + K     S+S K  +  ++    +E N     L         +M I  P  E     E       +  + AA+K
Subjt:  KVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMV--SLEENL----LVVADSPKSKEMEIQSPRSECRDRDEIKTTT--NSKHMAAMK

Query:  LQKVYKSFRTRRKLADCAVLVEQ
        LQKVY+SFRTRR+LADCAV+VEQ
Subjt:  LQKVYKSFRTRRKLADCAVLVEQ

AT4G33050.3 calmodulin-binding family protein2.5e-0436.19Show/hide
Query:  SGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTT---------------NSKHMAAMKLQKVYKSFRTRRKLADCA
        S K T+E S+SF   E+ K    + +  V+ ++ KS    +     E   R +IK  T                    AA  LQKVYKS+RTRR LADCA
Subjt:  SGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDEIKTTT---------------NSKHMAAMKLQKVYKSFRTRRKLADCA

Query:  VLVEQ
        V+VE+
Subjt:  VLVEQ

AT5G57010.1 calmodulin-binding family protein3.9e-0577.78Show/hide
Query:  AAMKLQKVYKSFRTRRKLADCAVLVEQ
        AA+ LQKVYKS+RTRR LADCAV+VE+
Subjt:  AAMKLQKVYKSFRTRRKLADCAVLVEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTTCTTTTCCTGCCCTTTGGCTAAATACATTGATGTGGAAAATGGTTTAGAATCCATTACTGTGAAATCCATCAGTTTCGGAGACGACAAAGTAAAAACTCC
GGTCCGATCCATCAGTTTCAATAGTAGAGATTTGGAGCCTATGGTAATGAAATCGGTCGGTTCAGGGAAGATGACATTAGAAATATCCGTTAGCTTCAAACGTAGAGAGT
TGGAGAAGATGGTATCACTAGAGGAAAACTTGCTTGTTGTAGCTGATAGTCCAAAGAGCAAAGAGATGGAGATTCAATCTCCTAGATCGGAGTGTCGTGATCGAGATGAG
ATCAAAACGACGACGAATTCGAAGCATATGGCTGCAATGAAATTGCAGAAAGTTTATAAAAGTTTCAGAACCAGGAGGAAGCTAGCAGATTGTGCTGTTCTTGTAGAACA
GAGTGGAAACTCTTGGATTTCGCTGAGCTCAAGAGGAGCTCGATATCGTTTTTCGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTTTCTTTTCCTGCCCTTTGGCTAAATACATTGATGTGGAAAATGGTTTAGAATCCATTACTGTGAAATCCATCAGTTTCGGAGACGACAAAGTAAAAACTCC
GGTCCGATCCATCAGTTTCAATAGTAGAGATTTGGAGCCTATGGTAATGAAATCGGTCGGTTCAGGGAAGATGACATTAGAAATATCCGTTAGCTTCAAACGTAGAGAGT
TGGAGAAGATGGTATCACTAGAGGAAAACTTGCTTGTTGTAGCTGATAGTCCAAAGAGCAAAGAGATGGAGATTCAATCTCCTAGATCGGAGTGTCGTGATCGAGATGAG
ATCAAAACGACGACGAATTCGAAGCATATGGCTGCAATGAAATTGCAGAAAGTTTATAAAAGTTTCAGAACCAGGAGGAAGCTAGCAGATTGTGCTGTTCTTGTAGAACA
GAGTGGAAACTCTTGGATTTCGCTGAGCTCAAGAGGAGCTCGATATCGTTTTTCGACATAGAGAAACACGAGACTGCCATTTCGCGGTGGGCTCGAGCTAGAACCAAAGC
TGCCAAGGTCGGAAAAGGCTTGTCCAAAAACGACAAAGGTCAAAAGCTTGCTTTACAACACTGGCTTGAGGCTATCGATCCACGACATCGATATGGCCATAACTTACAAT
TCTATTATGCTAAATGGCTTCATTGTCAGAGTGGACAACCCTTTTTCTATTGGTTGGATATAGGAGAAGGAAAGGAAGTGAATCTTGTTGAACAGTGCCCGAGATCGAAA
CTTCAACAACAGTGTATCAAGTACTTGGGTCCGCTGGAAAGAATGGCTTATGAAGTTGTTGTGGAAGATGGGAAGTTCATGTATAAGCTATCGAGGGAGCTCCTTGACAC
GACCGGAGTCGATAAGCATGTGAAGTGGATATTTGTTCTCAGCACCTCTAAATCGTTGTACGTTGGCAAGAAACAGAAGGGTATGTTTCAGCATTCGAGTTTCTTGGCCG
GAGGAGCCACGTCCGCTGCTGGAAGATTGGTTGTCGAAAATGGGATCCTAAAGGCAGTTTGGCCTCATAGCGGTCATTACCGTCCCACGGAAGAAAACTTTCAGGAATTC
ATCTCTTTCCTTACAGAAAACAACGTCAACCTCACTGATGTAAAGATGAGTCCAGATGAAGAAGAAGACAATGGACTACAAATGCCAAAGAACAGTCACCATGTTCGATT
CGGCTCAACCGAGGAAGATTGGGTTCAAAAGTTGAGTGGTGGTCGAGACGACGACATAGCAGAGCTCATTGCTGAAGAAATAACTGACAAGAACTCGAGCACGTCGACTG
CCAAGCTGTTCGAGCCAAAGAGGTCGATCAACCTGAGTAGAAAACTAACCAATCTTCACATACCAGATCGAGGTAACCTGATCGAGAAACTCGAGATGGAAAATAAGTTA
GAAGAGGGGAATAGAAGTTGTGAAGTTGAGATCATCCCTGATGAATCAATACTGAAAAGAATAAACTCACACAAAGAAACCAAATCATACCAACTGGGAAGGCAGCTATC
CTGCAAATGGACAACGGGTGCAGGTCCCCGAATCGGGTGCGTTCGTGACTATCCCGTCGAGCTTCAGCTCCGAGCAATGGAGCAGGTGAGCTTGTCGCCAAGAATGGTGG
CTGCTCGGTCCGAAATTCAATGCTCGCCTCGGATCGCCAGTATGCTGAGCCCAAGGGTGTGCAGGGCAGTTGACATGATTCACCAAAGTAATCCACAAACTTGTTCCACA
GTTG
Protein sequenceShow/hide protein sequence
MGAFFSCPLAKYIDVENGLESITVKSISFGDDKVKTPVRSISFNSRDLEPMVMKSVGSGKMTLEISVSFKRRELEKMVSLEENLLVVADSPKSKEMEIQSPRSECRDRDE
IKTTTNSKHMAAMKLQKVYKSFRTRRKLADCAVLVEQSGNSWISLSSRGARYRFST