; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G009340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G009340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome locationCmo_Chr10:4668594..4669217
RNA-Seq ExpressionCmoCh10G009340
SyntenyCmoCh10G009340
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056017.1 DUF4228 domain protein [Cucumis melo var. makuwa]4.1e-9179.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

KAG6590171.1 hypothetical protein SDJN03_15594, partial [Cucurbita argyrosperma subsp. sororia]2.7e-11499.52Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_022961145.1 uncharacterized protein LOC111461744 [Cucurbita moschata]7.0e-115100Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_022988214.1 uncharacterized protein LOC111485518 [Cucurbita maxima]2.9e-11398.07Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNA+SPC+IPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_023516713.1 uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo]1.7e-11399.03Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVG 
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein9.3e-8976.89Show/hide
Query:  MGNAMSPCLIPPSITNRH-RSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCL+  SI+  H R S VKL+F++GPT+ LAG HHFAGEIMFQFPDM+VCHA+SFFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSITNRH-RSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN + EKFS  CPFEYVRG NGK LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC1034919832.0e-9179.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein2.0e-9179.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A6J1HB88 uncharacterized protein LOC1114617443.4e-115100Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

A0A6J1JKY3 uncharacterized protein LOC1114855181.4e-11398.07Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNA+SPC+IPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein1.1e-1432.83Show/hide
Query:  CLIP-PSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIG
        CL P P  T+      +KL+ S G  ++         E+   FP   +C +D  +IG + P L+  + L  G  Y +LP D F  ND+  L+ ++L    
Subjt:  CLIP-PSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIG

Query:  AGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK
         G    +K      PF   +G  G+ L I+V  EF+  L+  G              GGEG G +C+T +LKK Y QLVG  +   W P LETI+E K
Subjt:  AGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK

AT5G12340.1 unknown protein1.5e-4345.74Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MG ++     P  I  R +     + F    T+ L G   H AGEIMF+FPD IVCHADSF+IG +IP+LA++D L+ G+TY VLPI+RF    +L+TS 
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLE
        L+   +  E              SS  PFEY +G NGK LIKV PEFI+ L+              GE    +C++PELKK YDQLVGT +  +WSP+L+
Subjt:  LAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLE

Query:  TISEYKIRYSPCRFVGFKVKQKE
        TISE+KIR SP RF G   KQ E
Subjt:  TISEYKIRYSPCRFVGFKVKQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAACCGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGG
AAGCCACCACTTCGCCGGAGAGATAATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACA
AGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATCGACCGATTCTCCTTGAACGACGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCG
GAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTCTCTCCCGGCGGCGC
GTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGA
CTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGTTTAAAGTCAAACAAAAGGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAACCGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGG
AAGCCACCACTTCGCCGGAGAGATAATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACA
AGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATCGACCGATTCTCCTTGAACGACGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCG
GAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTCTCTCCCGGCGGCGC
GTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGA
CTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGTTTAAAGTCAAACAAAAGGAAGGCTAA
Protein sequenceShow/hide protein sequence
MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAA
EKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG