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CmoCh10G009510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G009510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGalactose oxidase/kelch repeat superfamily protein
Genome locationCmo_Chr10:4768123..4779216
RNA-Seq ExpressionCmoCh10G009510
SyntenyCmoCh10G009510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER38639.1 galactose oxidase/kelch repeat superfamily protein [Striga asiatica]6.2e-0629.19Show/hide
Query:  MAVAVFPNLRLDSVPFLSSGIWCGPSTI---------------------VDAQRRLHIPVAVVISEAHPWLVS----------------------LFFKK
        M+VA  P LRL S+P   S +     TI                         + LHIP+ + + +AHPWL +                       F +K
Subjt:  MAVAVFPNLRLDSVPFLSSGIWCGPSTI---------------------VDAQRRLHIPVAVVISEAHPWLVS----------------------LFFKK

Query:  FMCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVHEDHLVIKLSILPKS
        FM FG+ CHH       PWSPPL           S  V  +GS  +TPELK      V E      ++ ++ED LV+ +  LPK+
Subjt:  FMCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVHEDHLVIKLSILPKS

KAA0063488.1 hypothetical protein E6C27_scaffold977G00790 [Cucumis melo var. makuwa]5.8e-0485.29Show/hide
Query:  ISNIDFTPAEMTATGVLPSSVRSEDISIAAKSGR
        +SNIDFTPAEMTATGVLPSSVRSEDISI  K  R
Subjt:  ISNIDFTPAEMTATGVLPSSVRSEDISIAAKSGR

KAG6590184.1 hypothetical protein SDJN03_15607, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3197.4Show/hide
Query:  KLSILPKSGWRGTLVIYAQVLEEYSNCITPIEHTCSSLMS-CMAVVTLLDIKRATDITYKAVAEYGLNQTLQRLLVI
        KLSILPKSGWRGTLVIYAQVLEEYSNCITPIEHTCSSLMS CMAVVTLLDIKRATDITYKAVAEYGLNQTLQRLLV+
Subjt:  KLSILPKSGWRGTLVIYAQVLEEYSNCITPIEHTCSSLMS-CMAVVTLLDIKRATDITYKAVAEYGLNQTLQRLLVI

KAG7023838.1 hypothetical protein SDJN02_14864, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-3576.42Show/hide
Query:  SSGIWCGPSTIVDAQRRLHIPVAVVISEAHPWLVSLFFKKFMCFGVLCHHVNTSFEYPWSPPLSWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVH
        SSGIWCGPSTIVDAQRRLHIPVAVVISEAHPWLVSL  K              + +  W    SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVH
Subjt:  SSGIWCGPSTIVDAQRRLHIPVAVVISEAHPWLVSLFFKKFMCFGVLCHHVNTSFEYPWSPPLSWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVH

Query:  EDHLVI
        EDHLVI
Subjt:  EDHLVI

TrEMBL top hitse value%identityAlignment
A0A0A9J4Q4 Uncharacterized protein6.3e-1257.58Show/hide
Query:  MCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNK
        MC G+ CHHVN SF YPWSPPL           SWNVQ +GS+ +TPELK V L PV  ISGI N+
Subjt:  MCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNK

A0A0A9K8G6 Uncharacterized protein1.8e-1460.87Show/hide
Query:  MCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGV
        MCFG+ CHHVN SF YPWSPPL           SWNVQF+GSM +TPELK V L PV  ISGI NK  +
Subjt:  MCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGV

A0A5A7Q0H3 Galactose oxidase/kelch repeat superfamily protein3.0e-0629.19Show/hide
Query:  MAVAVFPNLRLDSVPFLSSGIWCGPSTI---------------------VDAQRRLHIPVAVVISEAHPWLVS----------------------LFFKK
        M+VA  P LRL S+P   S +     TI                         + LHIP+ + + +AHPWL +                       F +K
Subjt:  MAVAVFPNLRLDSVPFLSSGIWCGPSTI---------------------VDAQRRLHIPVAVVISEAHPWLVS----------------------LFFKK

Query:  FMCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVHEDHLVIKLSILPKS
        FM FG+ CHH       PWSPPL           S  V  +GS  +TPELK      V E      ++ ++ED LV+ +  LPK+
Subjt:  FMCFGVLCHHVNTSFEYPWSPPL-----------SWNVQFDGSMCITPELKRVPLFPVVEISGIPNKVGVHEDHLVIKLSILPKS

A0A5A7V7C6 Uncharacterized protein2.8e-0485.29Show/hide
Query:  ISNIDFTPAEMTATGVLPSSVRSEDISIAAKSGR
        +SNIDFTPAEMTATGVLPSSVRSEDISI  K  R
Subjt:  ISNIDFTPAEMTATGVLPSSVRSEDISIAAKSGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCGCTGTATTTCCCAATCTCCGCTTGGATTCTGTCCCATTCCTGAGCTCCGGCATTTGGTGTGGACCTTCCACCATCGTTGATGCGCAACGTCGCTTGCACAT
TCCAGTTGCAGTCGTAATCTCTGAAGCACATCCGTGGCTTGTTTCCCTATTCTTCAAGAAATTCATGTGTTTTGGGGTTCTATGCCACCATGTGAATACTTCGTTTGAGT
ATCCTTGGTCACCTCCATTGAGTTGGAATGTGCAATTTGATGGCTCTATGTGCATTACTCCTGAGTTGAAGAGGGTGCCATTGTTTCCTGTTGTGGAGATCTCTGGCATT
CCTAATAAGGTCGGCGTCCATGAAGATCATCTTGTCATAAAATTGAGCATACTACCAAAGTCAGGCTGGCGGGGCACTTTGGTAATATATGCTCAAGTGTTGGAGGAATA
TAGTAACTGTATTACTCCAATTGAGCATACATGCTCTTCATTGATGAGTTGCATGGCCGTGGTTACGCTTTTGGATATCAAACGAGCAACTGACATAACATACAAAGCAG
TGGCTGAGTATGGTCTGAACCAAACATTGCAACGCTTGCTGGTGATTGAGATAGAGCTGATGAGGAAACCGAGTCGGGGCTTGGACTGCACCTGTGAACCAAATCCTTGT
CGAAGCCTCCCCGGTTTTTACACGAAGCTTTTCGATATCGAGATCCTCAAGTTGGCTGATAACGGAGTTGAATTGAAACGGGATATCCAATTTTTCAGCTACTTCTGTCA
ACCTAGGAGCCATTTGATCCAGAATCTCCTTCTGTGGATGAACACCGGCCTTGTAAAGACCAGGCCATGTCTTGAGGACTCGATCCGCAAGAGCCTCGGCGAAGTACGCC
GCAATGCGCTGCATTGTATCACCATCAGCAGAAGCAAGATAACCAACGTTGTGGAACAGAGGAGCAAAAAACAGAAAAAAAAAAAGAAGCTGAAGAAGAAAGTGTCGAGT
TGTCGGTTCATTACCGAGCTTCTTGAAGAGCGCTTTGTATTGCATTCTCAATTAAGCTTCCAGAAGCTGAATGCTCTTTTGGAATTGGAACAGATATCAGAATTCCACTT
CCGAGCCCAAGATTCATGTTGGCATCTGCAGAGGAACACAAACAAAAAAGTCATAACAGCATATCACTTATACGATCGTATATTAGTGACGGTATACCTGGAATACGATA
CCATCTATACACGAGTCCTGGGGATATCTAATATCGATTTTACGCCAGCTGAGATGACTGCTACAGGTGTTCTTCCTAGCTCAGTGAGATCAGAAGATATATCCATCGCT
GCAAAAAGCGGTCGAAAACAAGTAAATAAGATGGAAAAAGTTAATCATGGGTTTGTTGTCGTTCGTCCATACATAAGTATCTTACTTTTTTCACCATGTCTATGGACTCC
TCCAATGCCCCCAGTCACAAACACAGGGATGCCAACCTATAATAAATTTCCATGTACAGAACCGGTGAAAAGGTTCGAAAATCGAACAATTGAGAAGTGTGTTACTGAAT
ACGATGTGCTCACCCTAGAAGCAAAGAACATTGTTGCAGAAACAGTAGTAGCACCATTTCCTTTGCCAGCAACCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTCGCTGTATTTCCCAATCTCCGCTTGGATTCTGTCCCATTCCTGAGCTCCGGCATTTGGTGTGGACCTTCCACCATCGTTGATGCGCAACGTCGCTTGCACAT
TCCAGTTGCAGTCGTAATCTCTGAAGCACATCCGTGGCTTGTTTCCCTATTCTTCAAGAAATTCATGTGTTTTGGGGTTCTATGCCACCATGTGAATACTTCGTTTGAGT
ATCCTTGGTCACCTCCATTGAGTTGGAATGTGCAATTTGATGGCTCTATGTGCATTACTCCTGAGTTGAAGAGGGTGCCATTGTTTCCTGTTGTGGAGATCTCTGGCATT
CCTAATAAGGTCGGCGTCCATGAAGATCATCTTGTCATAAAATTGAGCATACTACCAAAGTCAGGCTGGCGGGGCACTTTGGTAATATATGCTCAAGTGTTGGAGGAATA
TAGTAACTGTATTACTCCAATTGAGCATACATGCTCTTCATTGATGAGTTGCATGGCCGTGGTTACGCTTTTGGATATCAAACGAGCAACTGACATAACATACAAAGCAG
TGGCTGAGTATGGTCTGAACCAAACATTGCAACGCTTGCTGGTGATTGAGATAGAGCTGATGAGGAAACCGAGTCGGGGCTTGGACTGCACCTGTGAACCAAATCCTTGT
CGAAGCCTCCCCGGTTTTTACACGAAGCTTTTCGATATCGAGATCCTCAAGTTGGCTGATAACGGAGTTGAATTGAAACGGGATATCCAATTTTTCAGCTACTTCTGTCA
ACCTAGGAGCCATTTGATCCAGAATCTCCTTCTGTGGATGAACACCGGCCTTGTAAAGACCAGGCCATGTCTTGAGGACTCGATCCGCAAGAGCCTCGGCGAAGTACGCC
GCAATGCGCTGCATTGTATCACCATCAGCAGAAGCAAGATAACCAACGTTGTGGAACAGAGGAGCAAAAAACAGAAAAAAAAAAAGAAGCTGAAGAAGAAAGTGTCGAGT
TGTCGGTTCATTACCGAGCTTCTTGAAGAGCGCTTTGTATTGCATTCTCAATTAAGCTTCCAGAAGCTGAATGCTCTTTTGGAATTGGAACAGATATCAGAATTCCACTT
CCGAGCCCAAGATTCATGTTGGCATCTGCAGAGGAACACAAACAAAAAAGTCATAACAGCATATCACTTATACGATCGTATATTAGTGACGGTATACCTGGAATACGATA
CCATCTATACACGAGTCCTGGGGATATCTAATATCGATTTTACGCCAGCTGAGATGACTGCTACAGGTGTTCTTCCTAGCTCAGTGAGATCAGAAGATATATCCATCGCT
GCAAAAAGCGGTCGAAAACAAGTAAATAAGATGGAAAAAGTTAATCATGGGTTTGTTGTCGTTCGTCCATACATAAGTATCTTACTTTTTTCACCATGTCTATGGACTCC
TCCAATGCCCCCAGTCACAAACACAGGGATGCCAACCTATAATAAATTTCCATGTACAGAACCGGTGAAAAGGTTCGAAAATCGAACAATTGAGAAGTGTGTTACTGAAT
ACGATGTGCTCACCCTAGAAGCAAAGAACATTGTTGCAGAAACAGTAGTAGCACCATTTCCTTTGCCAGCAACCTTATAA
Protein sequenceShow/hide protein sequence
MAVAVFPNLRLDSVPFLSSGIWCGPSTIVDAQRRLHIPVAVVISEAHPWLVSLFFKKFMCFGVLCHHVNTSFEYPWSPPLSWNVQFDGSMCITPELKRVPLFPVVEISGI
PNKVGVHEDHLVIKLSILPKSGWRGTLVIYAQVLEEYSNCITPIEHTCSSLMSCMAVVTLLDIKRATDITYKAVAEYGLNQTLQRLLVIEIELMRKPSRGLDCTCEPNPC
RSLPGFYTKLFDIEILKLADNGVELKRDIQFFSYFCQPRSHLIQNLLLWMNTGLVKTRPCLEDSIRKSLGEVRRNALHCITISRSKITNVVEQRSKKQKKKKKLKKKVSS
CRFITELLEERFVLHSQLSFQKLNALLELEQISEFHFRAQDSCWHLQRNTNKKVITAYHLYDRILVTVYLEYDTIYTRVLGISNIDFTPAEMTATGVLPSSVRSEDISIA
AKSGRKQVNKMEKVNHGFVVVRPYISILLFSPCLWTPPMPPVTNTGMPTYNKFPCTEPVKRFENRTIEKCVTEYDVLTLEAKNIVAETVVAPFPLPATL