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CmoCh10G009600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G009600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationCmo_Chr10:4827571..4828449
RNA-Seq ExpressionCmoCh10G009600
SyntenyCmoCh10G009600
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006749 - glutathione metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590190.1 Lichenase, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1593.48Show/hide
Query:  GLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL
        GLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT ++
Subjt:  GLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL

KAG7023843.1 Glucan endo-1,3-beta-glucosidase, basic isoform, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1493.33Show/hide
Query:  LKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL
        LKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT ++
Subjt:  LKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL

XP_022961205.1 glucan endo-1,3-beta-glucosidase-like isoform X1 [Cucurbita moschata]6.6e-2695.59Show/hide
Query:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL
        MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT ++
Subjt:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL

XP_022988224.1 uncharacterized protein LOC111485526 isoform X2 [Cucurbita maxima]6.0e-2793.06Show/hide
Query:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTLSHHL
        MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTG  S ++
Subjt:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTLSHHL

XP_023516506.1 uncharacterized protein LOC111780362 isoform X1 [Cucurbita pepo subsp. pepo]6.6e-2695.59Show/hide
Query:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL
        MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT ++
Subjt:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL

TrEMBL top hitse value%identityAlignment
A0A6J1DLI3 (1->3)-beta-glucan endohydrolase5.9e-1272.73Show/hide
Query:  FRSVFVLLLASLISLVFHRFIGLKSGNMVM--AIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT
        F SV +LLL +LIS  F R  GLKSGNM M  AIE+VDSMALLPFGSAS I SF RLPQCGGPR T
Subjt:  FRSVFVLLLASLISLVFHRFIGLKSGNMVM--AIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT

A0A6J1HBJ9 (1->3)-beta-glucan endohydrolase3.2e-2695.59Show/hide
Query:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL
        MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT ++
Subjt:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTL

A0A6J1HCE1 thaumatin-like protein 1b isoform X26.5e-1166.67Show/hide
Query:  MFRSVFVL-LLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT
        MF S+ VL LL +LIS  F+  IG +SGN  MAIED DSMALLPFGS S IG F R PQCGGP RT
Subjt:  MFRSVFVL-LLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT

A0A6J1JEJ4 thaumatin-like protein 1b isoform X25.0e-1166.67Show/hide
Query:  MFRSVFVL-LLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT
        MF S+ VL LL +LIS  F+  IG +SGN  MAIED DSMALLPFGS S IG F R PQCGGP RT
Subjt:  MFRSVFVL-LLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRT

A0A6J1JKZ2 uncharacterized protein LOC111485526 isoform X22.9e-2793.06Show/hide
Query:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTLSHHL
        MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTG  S ++
Subjt:  MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTLSHHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGCTCCGTTTTTGTTCTTCTCCTTGCGTCTTTGATTTCTCTTGTTTTCCACCGATTCATAGGTTTGAAGTCGGGAAATATGGTGATGGCGATTGAAGATGTGGA
TTCTATGGCTCTTTTACCGTTTGGATCTGCTTCTCGCATTGGCAGCTTCTTTCGACTTCCTCAATGTGGCGGCCCTCGCCGGACAGGTACTCTTTCTCATCACTTGTTTG
TTTTTTCGTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
TGGTGTTTTGAACAAATCAACCCTCCAACACCCTATTTATTACGCAATCAATTTCCAATTCAATTTTTTCCGTTGAAATCTGGGGACAACCTCTCCACAGAAGTTAAGAT
GGGAAGGAGAAACAGAGGTACACGCCTCTCCGACTTGAATCAGTTCAGTGCTCGTTCAAGGCTTCTTCAATCTTCTCCATGTTTCGCTCCGTTTTTGTTCTTCTCCTTGC
GTCTTTGATTTCTCTTGTTTTCCACCGATTCATAGGTTTGAAGTCGGGAAATATGGTGATGGCGATTGAAGATGTGGATTCTATGGCTCTTTTACCGTTTGGATCTGCTT
CTCGCATTGGCAGCTTCTTTCGACTTCCTCAATGTGGCGGCCCTCGCCGGACAGGTACTCTTTCTCATCACTTGTTTGTTTTTTCGTTCTTCTGAATGCATTTCTGTGGT
TTACTAAATCGTTTATTTATTCAATTTTGAGCTTGTTGCTTCTGATTGGCATCCCACAACAATTGTTTTAGCTAGCATTCAATTGGATTCTGAAATTTGCCTGATATTTT
GGGATTCATGTCGAATTTCTGTGTTTCAGTTTCTTAATCTTTTCTTTTTCTGTAACTAGGATAATGAGCTCCATTCTTTGTATTATGCTTATTGTTATGACCCACTCACC
AATCTCGAGAGGCTTTCTTCAACTGTACACCCACTAAAATAAGATATTTAGTTGCTAAGATTCGATTCATAATCATTTGGGTTTTTTATTTTTAGTTTTTGAAGATTGTG
TTTGTTCTATACATATTCATAGCC
Protein sequenceShow/hide protein sequence
MFRSVFVLLLASLISLVFHRFIGLKSGNMVMAIEDVDSMALLPFGSASRIGSFFRLPQCGGPRRTGTLSHHLFVFSFF