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CmoCh10G010050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G010050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRho GTPase-activating gacO-like protein
Genome locationCmo_Chr10:5227406..5229587
RNA-Seq ExpressionCmoCh10G010050
SyntenyCmoCh10G010050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590227.1 hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia]7.7e-6699.28Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_022960708.1 uncharacterized protein LOC111461426 [Cucurbita moschata]1.6e-66100Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_022988232.1 uncharacterized protein LOC111485534 [Cucurbita maxima]4.2e-6496.38Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK T+TNHDDAGSGEEEKIPAQKRRGRPQKPLKDE+DEEE EKIEDDDSENVKGCDIVSKEMK PPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]2.9e-6598.55Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_038879962.1 uncharacterized protein LOC120071662 [Benincasa hispida]3.3e-6193.48Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIP QKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

TrEMBL top hitse value%identityAlignment
A0A0A0LXE8 Uncharacterized protein4.7e-6192.75Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A1S3BRW6 uncharacterized protein LOC1034925114.7e-6192.75Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A5A7TJZ9 Uncharacterized protein4.7e-6192.75Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A6J1H9S1 uncharacterized protein LOC1114614267.5e-67100Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A6J1JCI2 uncharacterized protein LOC1114855342.0e-6496.38Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK T+TNHDDAGSGEEEKIPAQKRRGRPQKPLKDE+DEEE EKIEDDDSENVKGCDIVSKEMK PPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42190.1 unknown protein7.8e-2448.59Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMK---SPPAAENGKRRRRSSQVKEKLDPVKD
        M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE    E+DD E V+  ++  ++ +       +++ K R+R        D  ++
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMK---SPPAAENGKRRRRSSQVKEKLDPVKD

Query:  ENGDGTRSSTDESTRSN--GFRHNGSRRKSKPHRAAEAGVNC
        ENG G++ +TD+STRS   GFR NGSRRKSKP RAAEA V C
Subjt:  ENGDGTRSSTDESTRSN--GFRHNGSRRKSKPHRAAEAGVNC

AT3G57930.1 unknown protein5.9e-2450Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KP RAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC

AT3G57930.2 unknown protein5.9e-2450Show/hide
Query:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KP RAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTTGCAATCTGTTGCATGATTTTTCTTTCTTGGAGTGCTTAAAGAGGATGGGTAGAGGTCGGGGAAAGGGGAGGAAGTTTACCGTGACGAATCACGAT
GATGCTGGAAGCGGTGAGGAAGAGAAGATCCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCATTGAAGGACGAGATTGACGAGGAGGAAACCGAAAAGATA
GAAGACGACGACAGCGAGAACGTGAAAGGCTGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGAAGGAGAAGAAGCTCACAA
GTGAAAGAAAAGCTCGATCCAGTCAAAGATGAAAATGGGGACGGAACACGGTCGAGCACCGATGAATCAACAAGATCAAATGGATTTCGTCACAACGGAAGCAGG
CGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTGAACTGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTTGCAATCTGTTGCATGATTTTTCTTTCTTGGAGTGCTTAAAGAGGATGGGTAGAGGTCGGGGAAAGGGGAGGAAGTTTACCGTGACGAATCACGAT
GATGCTGGAAGCGGTGAGGAAGAGAAGATCCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCATTGAAGGACGAGATTGACGAGGAGGAAACCGAAAAGATA
GAAGACGACGACAGCGAGAACGTGAAAGGCTGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGAAGGAGAAGAAGCTCACAA
GTGAAAGAAAAGCTCGATCCAGTCAAAGATGAAAATGGGGACGGAACACGGTCGAGCACCGATGAATCAACAAGATCAAATGGATTTCGTCACAACGGAAGCAGG
CGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTGAACTGCAGGTAAAACAACCTTAGTGAATGAGGCATAGAGATGTCGTGATAGATTACCATATTTGCT
GCGTATTGTTATCTCTAAAGAACTGTTGAATTCAGTATGATCCACTGTGCTTGTTTTATTATTCTTTCTCTCTTCACCATATGTTCTTAACATTACAACAGAATG
TTCTAACTAAGAATGAAATGGATCAGCATTCTTTACAATGA
Protein sequenceShow/hide protein sequence
MGSCNLLHDFSFLECLKRMGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQ
VKEKLDPVKDENGDGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR