; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G011110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S2, chloroplastic
Genome locationCmo_Chr10:6997622..7000155
RNA-Seq ExpressionCmoCh10G011110
SyntenyCmoCh10G011110
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006412 - translation (biological process)
GO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0032549 - ribonucleoside binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR018130 - Ribosomal protein S2, conserved site
IPR005706 - Ribosomal protein S2, bacteria/mitochondria/plastid
IPR001865 - Ribosomal protein S2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJF46372.1 ribosomal protein S2 [Cucumis melo]2.8e-7494.52Show/hide
Query:  SFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVA
        S  FL+K SEEVGGEMTRRYWNIHL EMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLT+TARFLSEACDLVFDAA+RGKQFLIVGTKNKAADSVA
Subjt:  SFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVA

Query:  RAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        RAATR RCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
Subjt:  RAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

QQK90302.1 ribosomal protein S2 [Ulmus pumila]4.9e-7192.41Show/hide
Query:  FFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR
        FFFLKK  E+V  EMTRRYWNI+ EEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR
Subjt:  FFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR

Query:  AATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        AA +ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG LN
Subjt:  AATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

QVV95934.1 ribosomal protein S2 [Spiraea trilobata]3.4e-7280.92Show/hide
Query:  NGNLDLKKFV----------KLIHLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACD
        NG   LK+ V          +++HL  FF  K+  +EV  EMTRRYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACD
Subjt:  NGNLDLKKFV----------KLIHLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACD

Query:  LVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH
        LVFDAASRGKQFLIVGTKNKAADSVARAA +ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG LNH
Subjt:  LVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH

YP_010022296.1 ribosomal protein S2 [Elaeocarpus japonicus]8.4e-7189.47Show/hide
Query:  HLVSFFFLKKASE--EVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKA
        +LVSFFF +K  E  EVGGEMTRRYWNIHLEEMM AGVHFGHGTRKWNPRMAPYIS KRKGIHI NLTRTARFLSEACDLVFDAA RGKQFLIVGTKNKA
Subjt:  HLVSFFFLKKASE--EVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKA

Query:  ADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH
        ADSVARAA RAR HYVNKKWLGG+LTNWSTTETRLHKFRDLR EQKTG LNH
Subjt:  ADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH

YP_010034235.1 ribosomal protein S2 [Syzygium nervosum]3.8e-7190.6Show/hide
Query:  HLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD
        +LV+FFF KK   + GGEMTRRYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLT+TARFLSEACDLVFDAASRGKQFLIVGTKNKAAD
Subjt:  HLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD

Query:  SVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        SVARAA RARCHYVNKKWLGGMLTNWSTTETRLH+FRDLRTEQKTG LN
Subjt:  SVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

TrEMBL top hitse value%identityAlignment
A0A4D6NNC8 Multifunctional fusion protein9.1e-7183.23Show/hide
Query:  LNGNLD----LKKFVKLIHLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDA
        L G +D    LK+ V L  ++     KK  +EV GEMTRRYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDA
Subjt:  LNGNLD----LKKFVKLIHLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDA

Query:  ASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        ASRGKQFLIVGTKNKAADSVARAA +ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG LN
Subjt:  ASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

A0A6M3W1W6 30S ribosomal protein S2, chloroplastic1.4e-7494.52Show/hide
Query:  SFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVA
        S  FL+K SEEVGGEMTRRYWNIHL EMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLT+TARFLSEACDLVFDAA+RGKQFLIVGTKNKAADSVA
Subjt:  SFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVA

Query:  RAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        RAATR RCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
Subjt:  RAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

A0A7L9R7N3 30S ribosomal protein S2, chloroplastic4.1e-7189.47Show/hide
Query:  HLVSFFFLKKASE--EVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKA
        +LVSFFF +K  E  EVGGEMTRRYWNIHLEEMM AGVHFGHGTRKWNPRMAPYIS KRKGIHI NLTRTARFLSEACDLVFDAA RGKQFLIVGTKNKA
Subjt:  HLVSFFFLKKASE--EVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKA

Query:  ADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH
        ADSVARAA RAR HYVNKKWLGG+LTNWSTTETRLHKFRDLR EQKTG LNH
Subjt:  ADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNH

A0A7S7BHS8 Ribosomal protein S21.8e-7190.6Show/hide
Query:  HLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD
        +LV+FFF KK   + GGEMTRRYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLT+TARFLSEACDLVFDAASRGKQFLIVGTKNKAAD
Subjt:  HLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD

Query:  SVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        SVARAA RARCHYVNKKWLGGMLTNWSTTETRLH+FRDLRTEQKTG LN
Subjt:  SVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

A0A7T7CN63 Ribosomal protein S22.4e-7192.41Show/hide
Query:  FFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR
        FFFLKK  E+V  EMTRRYWNI+ EEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR
Subjt:  FFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAR

Query:  AATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        AA +ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG LN
Subjt:  AATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

SwissProt top hitse value%identityAlignment
A0ZZ24 30S ribosomal protein S2, chloroplastic3.7e-6994.66Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        M RRYWNI+LEEM+EAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAAS+GKQFLIVGTKNKAADSVARAA RARCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNW TTETRLHKFRDLRTEQKTGGLN
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

B1A924 30S ribosomal protein S2, chloroplastic3.7e-6995.42Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        M +RYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA RARCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNWSTTETRLHKFRDLRTEQKTG LN
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

Q2L8Z6 30S ribosomal protein S2, chloroplastic3.7e-6994.66Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        M RRYWNI+LEEM+EAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAAS+GKQFLIVGTKNKAADSVARAA RARCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNW TTETRLHKFRDLRTEQKTGGLN
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

Q49L09 30S ribosomal protein S2, chloroplastic3.7e-6995.42Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        MTRRYWNI+LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLT+TARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA RARCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNWSTTETRLHKFRDLRTEQK G LN
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

Q4VZP4 30S ribosomal protein S2, chloroplastic2.7e-7298.47Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAA+RGKQFLIVGTKNKAADSVARAATR RCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN

Arabidopsis top hitse value%identityAlignment
ATCG00160.1 ribosomal protein S21.9e-6893.13Show/hide
Query:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW
        MT+RYWNI LEEMM AGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD V+RAA RARCHYVNKKW
Subjt:  MTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKW

Query:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN
        LGGMLTNWSTTE RLHKFRDLRTEQKT G N
Subjt:  LGGMLTNWSTTETRLHKFRDLRTEQKTGGLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACCTTCTATGGATTTTACTACATTACTTATCTTATGAAGCTTGTGAACATCATAATACTTCCATGGATACCTTCGCGACTATTGCTCGACATTTGTTAGGCAA
AGTCGCCGATCTCAAGCACATGGCTCGCTGCTGTGACAACTTACTCAATGGCAACTTAGACTTAAAAAAATTTGTCAAGCTAATCCATCTCGTCTCTTTTTTTTTCTTAA
AAAAAGCGAGCGAGGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGG
AATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGC
AGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGC
TCGGGGGGATGTTAACAAATTGGTCTACTACCGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACCTTCTATGGATTTTACTACATTACTTATCTTATGAAGCTTGTGAACATCATAATACTTCCATGGATACCTTCGCGACTATTGCTCGACATTTGTTAGGCAA
AGTCGCCGATCTCAAGCACATGGCTCGCTGCTGTGACAACTTACTCAATGGCAACTTAGACTTAAAAAAATTTGTCAAGCTAATCCATCTCGTCTCTTTTTTTTTCTTAA
AAAAAGCGAGCGAGGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGG
AATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGC
AGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGC
TCGGGGGGATGTTAACAAATTGGTCTACTACCGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCATGAGTAA
Protein sequenceShow/hide protein sequence
MDHLLWILLHYLSYEACEHHNTSMDTFATIARHLLGKVADLKHMARCCDNLLNGNLDLKKFVKLIHLVSFFFLKKASEEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKW
NPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNHE