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CmoCh10G011300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:9325113..9325427
RNA-Seq ExpressionCmoCh10G011300
SyntenyCmoCh10G011300
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8477469.1 hypothetical protein FH972_025335 [Carpinus fangiana]2.6e-2672.04Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHSLKVKG               ETRKGVVSDEML GVEN+RRSGDSRIGQPFKLLLN WAGKR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

KAF7117209.1 hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii]1.9e-2468.82Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHSLKVKG               ETRKGVVSDEML GVEN+ RSGDSRIGQPF+LLLN WA KR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

KAG5222336.1 Vacuolar protein sorting-associated protein [Salix suchowensis]1.3e-2570.97Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHSLKVKG               ETRKGVVSDEML GVEN+RRSGDSRIGQPFKLL N WAGKR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

QHN92995.1 uncharacterized protein DS421_17g588830 [Arachis hypogaea]7.6e-2672.28Show/hide
Query:  MDVDKILPFISTLGWHSLKVKGE--TRK------------GVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHL-SRLKESKSDSHSSG
        MDVDKILP  STLGWHSL+VKGE  TRK            GVVSDEML GVEN+RRSGDSRIGQPF+LLLN  AGKR+P +LKHL S+ KESKSDSHSSG
Subjt:  MDVDKILPFISTLGWHSLKVKGE--TRK------------GVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHL-SRLKESKSDSHSSG

Query:  E
        E
Subjt:  E

RYQ90674.1 hypothetical protein Ahy_B09g096705 isoform B [Arachis hypogaea]5.4e-2471.26Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS
        MDVDKILP  STLGWHSL+VKG               ETRKGVVSDEMLWGVEN+RRSGDSRIGQPF+LLLN  AGKR+P +LKHLS
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS

TrEMBL top hitse value%identityAlignment
A0A2N9HUL9 Uncharacterized protein ycf683.7e-2670.97Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHSLKVKG               ETRKGVVSDEML GVEN+RRSGDSRIGQPF+LLLN WAGKR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

A0A2P2JY74 Uncharacterized protein ycf683.1e-2570.53Show/hide
Query:  MDVDKILPFISTLGWHS--LKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHS  LKVKG               ETRKGVVSDEML GVEN+RRSGDSRIGQPFKLLLN WAGKR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHS--LKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

A0A444XM41 Uncharacterized protein2.6e-2471.26Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS
        MDVDKILP  STLGWHSL+VKG               ETRKGVVSDEMLWGVEN+RRSGDSRIGQPF+LLLN  AGKR+P +LKHLS
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS

A0A5N6L0U6 Uncharacterized protein1.3e-2672.04Show/hide
Query:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK
        MDVDKILPF STLGWHSLKVKG               ETRKGVVSDEML GVEN+RRSGDSRIGQPFKLLLN WAGKR+P ELKHLS  ++ K
Subjt:  MDVDKILPFISTLGWHSLKVKG---------------ETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESK

A0A6N2L5J2 Uncharacterized protein ycf68 (Fragment)1.1e-2777.78Show/hide
Query:  MDVDKILPFISTLGWHSLKVKGET---RKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS-RLKESKSDSHSSGE
        MDVDKILPF STLGWHSLKVKGE     +GVVSDEML GVEN+RRSGDSRIGQPFKLL N WAGKR+P ELKHLS + K  +SDS SSGE
Subjt:  MDVDKILPFISTLGWHSLKVKGET---RKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLS-RLKESKSDSHSSGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGATAAGATCCTTCCATTTATTAGCACCTTAGGATGGCATAGCCTGAAAGTTAAGGGCGAGACGAGGAAGGGCGTAGTCAGCGACGAAATGCTTTGGGGAGT
TGAAAATCAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAACTCATGGGCAGGCAAGAGAGAACCTAGCGAACTGAAACATCTTAGTAGAC
TAAAAGAAAGCAAAAGCGATTCCCATAGTAGCGGCGAGTGGGAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGATAAGATCCTTCCATTTATTAGCACCTTAGGATGGCATAGCCTGAAAGTTAAGGGCGAGACGAGGAAGGGCGTAGTCAGCGACGAAATGCTTTGGGGAGT
TGAAAATCAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAACTCATGGGCAGGCAAGAGAGAACCTAGCGAACTGAAACATCTTAGTAGAC
TAAAAGAAAGCAAAAGCGATTCCCATAGTAGCGGCGAGTGGGAACAGTGA
Protein sequenceShow/hide protein sequence
MDVDKILPFISTLGWHSLKVKGETRKGVVSDEMLWGVENQRRSGDSRIGQPFKLLLNSWAGKREPSELKHLSRLKESKSDSHSSGEWEQ