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CmoCh10G011440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr10:9658281..9658811
RNA-Seq ExpressionCmoCh10G011440
SyntenyCmoCh10G011440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590370.1 hypothetical protein SDJN03_15793, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5098.15Show/hide
Query:  EQELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
        + ELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
Subjt:  EQELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL

Query:  LNSLNRVE
        LNSLNRVE
Subjt:  LNSLNRVE

KGN66104.1 hypothetical protein Csa_007574 [Cucumis sativus]1.3e-4261.62Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSVSSLKNDVLDE----QELHS---SKVDDSCVTPSHIGDKSD
        MDNR+ KF FFDI YQ+FHFIM++LSSKARE VTLGN V H+ N SS EL  S NS+HS SSL ND L E    QEL +   S   DS +T  H+ +  +
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSVSSLKNDVLDE----QELHS---SKVDDSCVTPSHIGDKSD

Query:  ---------KNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
                 K+  FV LPST K APKK+VSI E VEDIDSIMKERRK KG  KSKSFDFDNEYD SLKP RSILKVGS+ D  DL
Subjt:  ---------KNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL

XP_022159281.1 uncharacterized protein LOC111025690 [Momordica charantia]3.8e-4558.33Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL------------------RSVNSDHSVSSLKNDVLD-EQELHSSKVDDSC
        MDN ECKF  FDICY+LFHF+MK+LSSKA+ETVTLG   S +SN S+ E+                    +NSDH +SSL ND  +  +ELHS + + S 
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL------------------RSVNSDHSVSSLKNDVLD-EQELHSSKVDDSC

Query:  VTPSHIGDKSDKN--------HHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS-LNDKSDLLNSL
             I DK+D N           VPLPS  K  PKKIVSIKETVEDI+SIM +RRK+KGTKKSKSFDFDN YDGSLKP+RSILKVGS +NDKSD+LNSL
Subjt:  VTPSHIGDKSDKN--------HHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS-LNDKSDLLNSL

Query:  NRVE
        N VE
Subjt:  NRVE

XP_022961566.1 uncharacterized protein LOC111462109 [Cucurbita moschata]2.3e-5099.07Show/hide
Query:  QELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL
        +ELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL
Subjt:  QELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL

Query:  NSLNRVE
        NSLNRVE
Subjt:  NSLNRVE

XP_038880493.1 uncharacterized protein LOC120072152 [Benincasa hispida]4.6e-4362.5Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRSVNS-DHSVSSLKNDVL----DEQEL---HSSKVDDSCVTPSH------
        MDN+  KF FFDI YQ+FHFIMK++SSKA+ETV LGN VSH+SN SSQEL +  S DHS SSL ND L    + QEL    +S    S +T +H      
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRSVNS-DHSVSSLKNDVL----DEQEL---HSSKVDDSCVTPSH------

Query:  --IGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
          +  + DKN+    LPST K APKK+VSI ETVEDIDSIM+ERRK KGTKKSKSFDFDN YD SLKPTRSILKVGS+ D SDL
Subjt:  --IGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL

TrEMBL top hitse value%identityAlignment
A0A0A0LYJ0 Uncharacterized protein6.5e-4361.62Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSVSSLKNDVLDE----QELHS---SKVDDSCVTPSHIGDKSD
        MDNR+ KF FFDI YQ+FHFIM++LSSKARE VTLGN V H+ N SS EL  S NS+HS SSL ND L E    QEL +   S   DS +T  H+ +  +
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSVSSLKNDVLDE----QELHS---SKVDDSCVTPSHIGDKSD

Query:  ---------KNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
                 K+  FV LPST K APKK+VSI E VEDIDSIMKERRK KG  KSKSFDFDNEYD SLKP RSILKVGS+ D  DL
Subjt:  ---------KNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL

A0A151TW58 Uncharacterized protein1.2e-0739.05Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSVSSLKNDVLDEQELHSSKVDDSCVTPSHIGDKSDKNHHFVPL
        M+ RE      +ICY+L+HFIMK L+S+A +TVTLG    H S  SS E+     + SV + +N  +DE               + +GD           
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSVSSLKNDVLDEQELHSSKVDDSCVTPSHIGDKSDKNHHFVPL

Query:  PSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS--LNDKSD
           +  APKKIVSI + VE+I S         G K+SK F  D + D   KP RSILKVGS  LNDKS+
Subjt:  PSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS--LNDKSD

A0A5D3CG66 Uncharacterized protein6.1e-4160Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRS-VNSDHSVSSLKNDVLDE----QEL---------HSSKVDDSCVTPSH
        MDNR+ KF F DI YQ+F+FI+++LSSKARE VTLGNPVSH+SN SS EL +  NSDHS SSL ND L E    QE           SS  +D    P  
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRS-VNSDHSVSSLKNDVLDE----QEL---------HSSKVDDSCVTPSH

Query:  IG---DKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL
        I    +   K+  FV LPST K APKK+VSI E VE IDSIMKER+K KG  KSKSFDFDNEYD SLKP RSILKVGS+ D  DL
Subjt:  IG---DKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDL

A0A6J1E3G0 uncharacterized protein LOC1110256901.8e-4558.33Show/hide
Query:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL------------------RSVNSDHSVSSLKNDVLD-EQELHSSKVDDSC
        MDN ECKF  FDICY+LFHF+MK+LSSKA+ETVTLG   S +SN S+ E+                    +NSDH +SSL ND  +  +ELHS + + S 
Subjt:  MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQEL------------------RSVNSDHSVSSLKNDVLD-EQELHSSKVDDSC

Query:  VTPSHIGDKSDKN--------HHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS-LNDKSDLLNSL
             I DK+D N           VPLPS  K  PKKIVSIKETVEDI+SIM +RRK+KGTKKSKSFDFDN YDGSLKP+RSILKVGS +NDKSD+LNSL
Subjt:  VTPSHIGDKSDKN--------HHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGS-LNDKSDLLNSL

Query:  NRVE
        N VE
Subjt:  NRVE

A0A6J1HAQ3 uncharacterized protein LOC1114621091.1e-5099.07Show/hide
Query:  QELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL
        +ELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL
Subjt:  QELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLL

Query:  NSLNRVE
        NSLNRVE
Subjt:  NSLNRVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATCGAGAATGTAAGTTTCCATTCTTCGACATATGTTACCAATTGTTCCATTTTATTATGAAACTCCTATCATCTAAAGCTCGAGAAACTGTTACTCTT
GGAAACCCGGTGTCACATGATTCAAATGGTTCGTCCCAAGAGCTCAGATCTGTGAATTCAGATCATTCTGTTTCGTCTCTTAAGAATGATGTTCTTGATGAACAG
GAGCTCCATTCGTCTAAAGTCGATGATTCTTGTGTTACTCCTTCGCATATCGGAGATAAGAGTGATAAGAATCATCATTTTGTACCATTGCCTTCTACAATCAAA
CATGCTCCAAAGAAAATTGTTAGTATCAAGGAAACGGTCGAGGATATTGATTCTATCATGAAGGAAAGGAGGAAGAACAAAGGAACAAAAAAGTCGAAATCTTTT
GATTTTGATAATGAATATGATGGTTCCTTGAAGCCTACTCGATCGATTCTCAAGGTTGGCTCATTAAACGATAAGTCAGATTTATTAAACTCTTTGAATCGTGTT
GAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAATCGAGAATGTAAGTTTCCATTCTTCGACATATGTTACCAATTGTTCCATTTTATTATGAAACTCCTATCATCTAAAGCTCGAGAAACTGTTACTCTT
GGAAACCCGGTGTCACATGATTCAAATGGTTCGTCCCAAGAGCTCAGATCTGTGAATTCAGATCATTCTGTTTCGTCTCTTAAGAATGATGTTCTTGATGAACAG
GAGCTCCATTCGTCTAAAGTCGATGATTCTTGTGTTACTCCTTCGCATATCGGAGATAAGAGTGATAAGAATCATCATTTTGTACCATTGCCTTCTACAATCAAA
CATGCTCCAAAGAAAATTGTTAGTATCAAGGAAACGGTCGAGGATATTGATTCTATCATGAAGGAAAGGAGGAAGAACAAAGGAACAAAAAAGTCGAAATCTTTT
GATTTTGATAATGAATATGATGGTTCCTTGAAGCCTACTCGATCGATTCTCAAGGTTGGCTCATTAAACGATAAGTCAGATTTATTAAACTCTTTGAATCGTGTT
GAGTAG
Protein sequenceShow/hide protein sequence
MDNRECKFPFFDICYQLFHFIMKLLSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSVSSLKNDVLDEQELHSSKVDDSCVTPSHIGDKSDKNHHFVPLPSTIK
HAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDGSLKPTRSILKVGSLNDKSDLLNSLNRVE