; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G011570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRoot phototropism protein 3-like isoform X1
Genome locationCmo_Chr10:9925186..9926205
RNA-Seq ExpressionCmoCh10G011570
SyntenyCmoCh10G011570
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050878.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]1.9e-7171.66Show/hide
Query:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF
        ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAF
Subjt:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF

Query:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        WFEPLPLVGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Subjt:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

KAG6590385.1 hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sororia]9.5e-13298.33Show/hide
Query:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
        MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDR+ILVFGSLDKFESSFPFLT+GL ISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
Subjt:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP

Query:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
        YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
Subjt:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK

Query:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        KRGLDYGQEIGLRWSGSKTIDRFDFS+LSSSRLSVYNLI
Subjt:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

TYK10230.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]8.4e-7272.19Show/hide
Query:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF
        ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAF
Subjt:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF

Query:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        WFEPLPLVGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Subjt:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

XP_022961362.1 uncharacterized protein LOC111461952 [Cucurbita moschata]1.3e-133100Show/hide
Query:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
        MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
Subjt:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP

Query:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
        YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
Subjt:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK

Query:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
Subjt:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

XP_022968782.1 uncharacterized protein LOC111467916 [Cucurbita maxima]2.7e-12695.82Show/hide
Query:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
        MT LEAFVLL CRFEHMCSLFYKTFFVLSHVVVHTVLS+QDR+ILVFGSLDKFESSFPFLTK LTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
Subjt:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP

Query:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
        YRMKLSTDRLRWDSLKISE TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEK SKKYQSSFVYSIEPFRHIVK
Subjt:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK

Query:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        KRGLDYGQEIGLRWSGSKTIDRFDFS+LSSSRLS+Y LI
Subjt:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

TrEMBL top hitse value%identityAlignment
A0A0A0LWG5 Uncharacterized protein2.6e-7171.81Show/hide
Query:  ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEA
        + + LDDPTC R +MKDKEEL S IYGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET+KVKLVKKEA
Subjt:  ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEA

Query:  FWFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        FWFEPLPLVGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIG RWSGSK++DRFDFS+LSS RLS+ NL+
Subjt:  FWFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

A0A5A7U6J2 Root phototropism protein 3-like isoform X19.1e-7271.66Show/hide
Query:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF
        ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAF
Subjt:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF

Query:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        WFEPLPLVGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Subjt:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

A0A5D3CFT9 Root phototropism protein 3-like isoform X14.1e-7272.19Show/hide
Query:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF
        ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAF
Subjt:  SRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAF

Query:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        WFEPLPLVGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Subjt:  WFEPLPLVGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

A0A6J1HA02 uncharacterized protein LOC1114619526.4e-134100Show/hide
Query:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
        MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
Subjt:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP

Query:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
        YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
Subjt:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK

Query:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
Subjt:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

A0A6J1HUG6 uncharacterized protein LOC1114679161.3e-12695.82Show/hide
Query:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
        MT LEAFVLL CRFEHMCSLFYKTFFVLSHVVVHTVLS+QDR+ILVFGSLDKFESSFPFLTK LTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP
Subjt:  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWP

Query:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK
        YRMKLSTDRLRWDSLKISE TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEK SKKYQSSFVYSIEPFRHIVK
Subjt:  YRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVK

Query:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI
        KRGLDYGQEIGLRWSGSKTIDRFDFS+LSSSRLS+Y LI
Subjt:  KRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTACAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACG
GTCCTGTCAAACCAAGACAGAGACATTCTGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAAAAGGTCTAACGATCTCGGAGTCTCGA
GGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTG
TCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAAT
GAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTG
GTTGGTGAGAAGTCGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATAGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATC
GGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGATTTTGTCTTCTTCGAGGTTGAGTGTATACAACTTGATCTGA
mRNA sequenceShow/hide mRNA sequence
TCAAACCTTGCCAGCGTATGGGAAATTATCTGTTCAGATTCAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTT
TTCTACAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAGACATTCTGGTTTTTGGATCATTGGACAAATTCGAGTCG
AGTTTTCCCTTTCTTACAAAAGGTCTAACGATCTCGGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGT
AGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAA
ATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTA
AAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTT
CGACACATAGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGATTTTGTCTTCT
TCGAGGTTGAGTGTATACAACTTGATCTGA
Protein sequenceShow/hide protein sequence
MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFLTKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKL
STDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVKKRGLDYGQEI
GLRWSGSKTIDRFDFSILSSSRLSVYNLI