; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G011830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationCmo_Chr10:10688581..10688953
RNA-Seq ExpressionCmoCh10G011830
SyntenyCmoCh10G011830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022925379.1 putative disease resistance protein RGA3 [Cucurbita moschata]1.2e-1341.94Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN PPDF FYK+ L+Q WIAQG  Q     N                                 CKMHD IHE  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL

Query:  ----------SSDKYLKVRKIFRL
                   SD+ L +R+  R+
Subjt:  ----------SSDKYLKVRKIFRL

XP_022973347.1 putative disease resistance protein RGA3 [Cucurbita maxima]1.6e-1344.66Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLP+SSLKQ FA CSN PPD+ FYK+ L+Q WIAQG  Q     N                                 CKMHDLI+E  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

XP_022975711.1 putative disease resistance protein RGA3, partial [Cucurbita maxima]1.6e-1344.66Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLP+SSLKQ FA CSN PPD+ FYK+ L+Q WIAQG  Q     N                                 CKMHDLI+E  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

XP_023521027.1 disease resistance protein RGA2-like [Cucurbita pepo subsp. pepo]8.4e-1547.57Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN PPDFLFYKKEL++ WIAQG        N                                 CKMHD IHE  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

XP_023535482.1 disease resistance protein RGA2-like [Cucurbita pepo subsp. pepo]2.2e-1549Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN PPDF+FYK+EL+Q WIAQG  Q   R N                                 CKMHD IHE  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL

TrEMBL top hitse value%identityAlignment
A0A6J1EC00 putative disease resistance protein RGA35.9e-1441.94Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN PPDF FYK+ L+Q WIAQG  Q     N                                 CKMHD IHE  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQN-------------------------------YICKMHDLIHEATCTISNDQNL

Query:  ----------SSDKYLKVRKIFRL
                   SD+ L +R+  R+
Subjt:  ----------SSDKYLKVRKIFRL

A0A6J1HC66 disease resistance protein RGA2-like1.0e-1344.66Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN PPDF F K++L+Q W+AQG  Q     N                                 CKMHDLI+E TC ISNDQ+L
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

A0A6J1HC68 disease resistance protein RGA2-like isoform X11.7e-1343.69Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLPSSSLKQ FA CSN P DF+F+K+EL+Q W+AQG  Q     N                                 CKMHDLI+E  C ISNDQ+L
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

A0A6J1I7A4 putative disease resistance protein RGA37.7e-1444.66Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLP+SSLKQ FA CSN PPD+ FYK+ L+Q WIAQG  Q     N                                 CKMHDLI+E  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

A0A6J1IEY9 putative disease resistance protein RGA37.7e-1444.66Show/hide
Query:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL
        +DRLP+SSLKQ FA CSN PPD+ FYK+ L+Q WIAQG  Q     N                                 CKMHDLI+E  C ISNDQNL
Subjt:  MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNY-------------------------------ICKMHDLIHEATCTISNDQNL

Query:  SSD
          D
Subjt:  SSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGTCTACCATCTTCCTCATTGAAACAATATTTTGCCGATTGTTCAAATATCCCACCAGATTTTCTCTTCTATAAGAAAGAACTTATTCAGACCTGGATAGCACA
AGGATGTTATCAAGCATGCGAGAGGCAAAATTATATTTGTAAGATGCATGATCTTATACATGAAGCCACATGCACTATTTCGAATGATCAAAATTTGAGTTCAGATAAAT
ATCTCAAGGTGAGAAAGATCTTTCGATTAGCCAAAAAATACGAACACTCTATTGCACTACAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCGTCTACCATCTTCCTCATTGAAACAATATTTTGCCGATTGTTCAAATATCCCACCAGATTTTCTCTTCTATAAGAAAGAACTTATTCAGACCTGGATAGCACA
AGGATGTTATCAAGCATGCGAGAGGCAAAATTATATTTGTAAGATGCATGATCTTATACATGAAGCCACATGCACTATTTCGAATGATCAAAATTTGAGTTCAGATAAAT
ATCTCAAGGTGAGAAAGATCTTTCGATTAGCCAAAAAATACGAACACTCTATTGCACTACAAATGTAG
Protein sequenceShow/hide protein sequence
MDRLPSSSLKQYFADCSNIPPDFLFYKKELIQTWIAQGCYQACERQNYICKMHDLIHEATCTISNDQNLSSDKYLKVRKIFRLAKKYEHSIALQM