; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G011860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G011860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein At3g07870-like
Genome locationCmo_Chr10:10774855..10775560
RNA-Seq ExpressionCmoCh10G011860
SyntenyCmoCh10G011860
Gene Ontology termsNA
InterPro domainsIPR011044 - Quinoprotein amine dehydrogenase, beta chain-like
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022933323.1 F-box protein At3g07870-like [Cucurbita moschata]1.3e-11188.32Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD++KGN FTC YGFGFCPKTKQYKVVRS TVRDRNSI+HNYKTEIFAFGTRPEWT+IESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFP+DDGYFPCI IFNGAI+LTLS+E Y+YRVWKMKEDG WIKAFSVI P +NKNILSFSKSTVE IKICKDG+ILCLWAG ELVLYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

XP_022961419.1 F-box protein At3g07870-like [Cucurbita moschata]7.3e-11590.19Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD+FKGN FTC+YGFGFCPKTKQYKVVRS TVRDRNSI+HNYKTEIFAFGTRPEWTRIESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFP+DDGYFPCI IFNGAIHLTLSME Y+YRVWKMKEDG WIKAFSVI PD+NKNILSFSKSTVE IKICKDG+ILCLWAG EL+LYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

XP_023516668.1 F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]4.3e-11590.19Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD++KGN FTC YGFGFCPKTKQYKVVRS T+RDRNSI+HNYKTEIFAFGTRPEWT+IESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFPNDDGYFPCI IFNGAIHLTLSME Y+YRVWKMKEDGSWIKAFSVI PD+NKNILSFSKSTVE IKICKDG+ILCLWAG ELVLYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

XP_023519847.1 F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]1.4e-10280.75Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        MTNEYFELPKDEFKGN  TC YGFGFCPKTK YKVVR+ TV DRNS V NYK+EIFAFGTR EWTRIESP+YSFNGCHGVY NGGLHW+GQ++L  DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY  IPFPNDDGYFPCI +FNGA+HLTLSME +EY +WKMKEDGSWIKAFS   PD++KNILSFS+STVEQ+KICKDG+ILC+WAG ELVLY+
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDT
        P T+KMEKL+DDT
Subjt:  PTTKKMEKLIDDT

XP_023546461.1 F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]4.3e-11590.19Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD++KGN FTC YGFGFCPKTKQYKVVRS T+RDRNSI+HNYKTEIFAFGTRPEWT+IESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFPNDDGYFPCI IFNGAIHLTLSME Y+YRVWKMKEDGSWIKAFSVI PD+NKNILSFSKSTVE IKICKDG+ILCLWAG ELVLYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

TrEMBL top hitse value%identityAlignment
A0A6J1F4F5 F-box protein At3g07870-like6.2e-11288.32Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD++KGN FTC YGFGFCPKTKQYKVVRS TVRDRNSI+HNYKTEIFAFGTRPEWT+IESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFP+DDGYFPCI IFNGAI+LTLS+E Y+YRVWKMKEDG WIKAFSVI P +NKNILSFSKSTVE IKICKDG+ILCLWAG ELVLYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

A0A6J1HBS1 F-box protein At3g07870-like9.0e-10380.93Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        MTNEYFE+PKDEFKGN  TC YGFGFCPKTK YKV+R+ TV DRNSIVHNYK+EIFAFGTR EWTRIESP+ SF+GCHGVY NGGLHW+GQN+L RDVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFPNDDGYFP I +FNGA+HLTLSMEEYEYR+WKMKEDGSWIK+FSVI P   KN+LSFSKSTVEQIK  KDG+ILCLWAG +LVLY+
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTTI
        P T+KMEKL+DDT +
Subjt:  PTTKKMEKLIDDTTI

A0A6J1HBS8 F-box protein At3g07870-like2.0e-10280.28Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        MTNEYFELPKDEFKGN  TC YGFGFCPKTK YKVVR+ TV DRNS V NYK+EIFAFGTR EWTRIESP+YSFNGCHGVY NGGLHW+GQ++L  DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY  IPFPNDDGYFPCI +FNGA+HLTLSME +EY +WKMKEDGSWIKAFS   PD+ KNILSFS+ST+EQ+KICKDG+ILC+WAG ELVLY+
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDT
        P T+KMEKL+DDT
Subjt:  PTTKKMEKLIDDT

A0A6J1HDZ2 F-box protein At3g07870-like3.5e-11590.19Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY
        +TNEYFELPKD+FKGN FTC+YGFGFCPKTKQYKVVRS TVRDRNSI+HNYKTEIFAFGTRPEWTRIESPT SFNGCHGVY NGGLHWIGQNNLG DVIY
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIY

Query:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN
        RLNMEDEKY QIPFP+DDGYFPCI IFNGAIHLTLSME Y+YRVWKMKEDG WIKAFSVI PD+NKNILSFSKSTVE IKICKDG+ILCLWAG EL+LYN
Subjt:  RLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYN

Query:  PTTKKMEKLIDDTT
        PTTKKMEKLIDDTT
Subjt:  PTTKKMEKLIDDTT

A0A6J1HDZ8 F-box protein CPR30-like3.4e-10279.91Show/hide
Query:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVH-NYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVI
        MTNEYFELPKDEFKGN  TC YGFGFCPKTK YKVVR+FTV DRNS VH NYK+EIFAFGTR EWTRIESP+ SFNGCHGVY NGGLHW+GQ++L +DVI
Subjt:  MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVH-NYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVI

Query:  YRLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLY
        Y +NMEDEKY  IPFPN+DGYFPCI +FNGA+HLTLSME +EY +WKMKEDGSWIKAFS   PD++KNILSFS+STVEQIKICKDG+ILC+WAG ELVLY
Subjt:  YRLNMEDEKYVQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLY

Query:  NPTTKKMEKLIDDT
        +P T+KMEKL+DDT
Subjt:  NPTTKKMEKLIDDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGTTTTACTTGCTTCTATGGATTTGGATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAG
AAGCTTTACTGTTCGTGATAGAAACTCTATCGTCCATAACTACAAAACAGAGATTTTTGCCTTTGGGACCCGGCCGGAATGGACGCGTATTGAGTCACCGACTTATTCTT
TTAATGGATGTCATGGTGTTTACTCAAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCGGGATGTTATTTATCGTCTAAATATGGAAGATGAGAAATACGTG
CAGATTCCTTTTCCTAATGATGACGGTTATTTTCCTTGTATTGCAATATTTAACGGTGCAATTCATTTAACTCTTTCTATGGAGGAGTACGAGTATAGAGTGTGGAAGAT
GAAAGAAGATGGTTCGTGGATTAAAGCATTTAGTGTCATCGCACCAGATATCAATAAAAATATACTTTCCTTCTCAAAATCGACCGTGGAACAGATTAAAATATGTAAAG
ATGGAAGGATCCTGTGTCTTTGGGCTGGAGTTGAATTAGTATTGTATAATCCGACGACCAAGAAGATGGAGAAGTTAATAGATGATACAACTATATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGTTTTACTTGCTTCTATGGATTTGGATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAG
AAGCTTTACTGTTCGTGATAGAAACTCTATCGTCCATAACTACAAAACAGAGATTTTTGCCTTTGGGACCCGGCCGGAATGGACGCGTATTGAGTCACCGACTTATTCTT
TTAATGGATGTCATGGTGTTTACTCAAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCGGGATGTTATTTATCGTCTAAATATGGAAGATGAGAAATACGTG
CAGATTCCTTTTCCTAATGATGACGGTTATTTTCCTTGTATTGCAATATTTAACGGTGCAATTCATTTAACTCTTTCTATGGAGGAGTACGAGTATAGAGTGTGGAAGAT
GAAAGAAGATGGTTCGTGGATTAAAGCATTTAGTGTCATCGCACCAGATATCAATAAAAATATACTTTCCTTCTCAAAATCGACCGTGGAACAGATTAAAATATGTAAAG
ATGGAAGGATCCTGTGTCTTTGGGCTGGAGTTGAATTAGTATTGTATAATCCGACGACCAAGAAGATGGAGAAGTTAATAGATGATACAACTATATGTTAA
Protein sequenceShow/hide protein sequence
MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFGTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIYRLNMEDEKYV
QIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKLIDDTTIC