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CmoCh10G012010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G012010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L22-2-like
Genome locationCmo_Chr10:11760041..11762511
RNA-Seq ExpressionCmoCh10G012010
SyntenyCmoCh10G012010
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588488.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

KAG6590443.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]1.5e-5998.39Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022146066.1 60S ribosomal protein L22-2 [Momordica charantia]6.6e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022961443.1 60S ribosomal protein L22-2-like [Cucurbita moschata]2.3e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A6J1CY92 60S ribosomal protein L22-23.2e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1F0W8 60S ribosomal protein L22-23.2e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1HBU5 60S ribosomal protein L22-2-like1.1e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1HVX5 60S ribosomal protein L22-2-like1.1e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1I4P7 60S ribosomal protein L22-23.2e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L221.1e-3365.83Show/hide
Query:  AAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD
        A G K KK+ + FT+DCT PVED IMD A+ E+FL ERIKV GKAG L G  V++ R KSKITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+
Subjt:  AAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD

Query:  RNVYELRYFNIAENEGEEED
           YELRYF I ++E EEED
Subjt:  RNVYELRYFNIAENEGEEED

Q90YU6 60S ribosomal protein L228.4e-3464Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        + +    G K KK+ + FT+DCT PVED IMD A+ E+FL ERIKV GKAG L G  VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  AANKDRNVYELRYFNIAENEGEEED
        A  K+   YELRYF I ++E EEED
Subjt:  AANKDRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-31.7e-5587.9Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-23.5e-5688.71Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-12.3e-3966.67Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.6e-4066.67Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family2.5e-5788.71Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family2.5e-5788.71Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family2.5e-5788.71Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family1.2e-5687.9Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGAGGAGGTGCAGCTGGCCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTACGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGCTGGA
GAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACTGTCACTTCTGATAGCAACT
TCTCCAAGAGGTATCTGAAGTACTTGACGAAGAAGTACCTGAAGAAACACAACGTTCGGGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAACGTTTACGAACTC
AGGTACTTCAACATCGCCGAGAACGAGGGAGAGGAAGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
GTGGCCGTCATATCGGAATCCTCAGCAACTGTTTTTGTTATCGAAAATGAGTCGAGGAGGTGCAGCTGGCCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACT
GTACGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCT
GTTACTCGCGAGAAGAGTAAAATTACTGTCACTTCTGATAGCAACTTCTCCAAGAGGTATCTGAAGTACTTGACGAAGAAGTACCTGAAGAAACACAACGTTCGGGATTG
GCTACGAGTGATTGCTGCCAACAAAGATAGGAACGTTTACGAACTCAGGTACTTCAACATCGCCGAGAACGAGGGAGAGGAAGAAGATTAAATTTATGCATTCAAGGAAC
AAGTGTAGCTTGGAATCTGTCACTGGTTATGTTACTAGTGTTGCTTGTGTGATGCTCTCTCTATCTTTACATTTGAACTAAAGCAGTTTAGCAATTTTGTTTTGTTTGAC
AGACTTAGATCGCTGTTATTTTTTTGTGTCATATTTGAGTAAAACACCAACAATATTTCACTCATTTAATTAATGGTAGGTGGATCAAAGTATTTGTATTTTACTAAAAT
TTTGTATTGGCGTTTTAGAAATTTCATTTGGGGTTTTTTTTTTCCAT
Protein sequenceShow/hide protein sequence
MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYEL
RYFNIAENEGEEED