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CmoCh10G012150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G012150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNKAP family protein isoform X2
Genome locationCmo_Chr10:11892501..11895699
RNA-Seq ExpressionCmoCh10G012150
SyntenyCmoCh10G012150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023994.1 hypothetical protein SDJN02_15022, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-22100Show/hide
Query:  MEALLGSMRAWDTVVYEFKEEEMKKEKKALFTIHQRVDGTTFELIVHAKSSENAWE
        MEALLGSMRAWDTVVYEFKEEEMKKEKKALFTIHQRVDGTTFELIVHAKSSENAWE
Subjt:  MEALLGSMRAWDTVVYEFKEEEMKKEKKALFTIHQRVDGTTFELIVHAKSSENAWE

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]5.4e-1063.01Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEEN+RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]2.7e-0961.64Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEE +RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]2.7e-0961.64Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEE +RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]5.4e-1063.01Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEEN+RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

TrEMBL top hitse value%identityAlignment
A0A0A0LVZ3 Uncharacterized protein1.3e-0961.64Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEE +RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G2.6e-1063.01Show/hide
Query:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD
        H +    A EKQPEESSSPVQLS                   KILLKLDKSKEDKAEEN+RNELLKFLNSSFD
Subjt:  HAKSSENAWEKQPEESSSPVQLS-------------------KILLKLDKSKEDKAEENRRNELLKFLNSSFD

A0A6J1EV15 serine/arginine-rich splicing factor 11 isoform X12.9e-0952.38Show/hide
Query:  EEEMKKEKKALFTIHQRVDGTTFE-----LIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFL
        E EM    K     H++ DGT  E        H +    A EKQPEE SSSPVQLS                  KILLKLDKSKEDKAEEN+RNELLKFL
Subjt:  EEEMKKEKKALFTIHQRVDGTTFE-----LIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X12.9e-0952.38Show/hide
Query:  EEEMKKEKKALFTIHQRVDGTTFE-----LIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFL
        E EM    K     H++ DGT  E        H +    A EKQPEE SSSPVQLS                  KILLKLDKSKEDKAEEN+RNELLKFL
Subjt:  EEEMKKEKKALFTIHQRVDGTTFE-----LIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A6J1I4D4 NKAP family protein isoform X24.9e-0951.92Show/hide
Query:  EEEMKKEKKALFTIHQRVDGT----TFELIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFLN
        E EM    K     H++ DGT      +   H +    A EKQPEE SSSPVQLS                  KILLKLDKSKEDKAEEN+RNELLKFLN
Subjt:  EEEMKKEKKALFTIHQRVDGT----TFELIVHAKSSENAWEKQPEE-SSSPVQLS------------------KILLKLDKSKEDKAEENRRNELLKFLN

Query:  SSFD
        SSFD
Subjt:  SSFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27860.1 unknown protein7.1e-0866.67Show/hide
Query:  EKQPEESSSPVQLSKILLKLDKSKEDKAEENRRNELLKFLNSSFD
        +K   E  S V   KILLK+DKSKEDKA E++RNELLKFLN+SFD
Subjt:  EKQPEESSSPVQLSKILLKLDKSKEDKAEENRRNELLKFLNSSFD

AT5G27860.2 unknown protein7.1e-0866.67Show/hide
Query:  EKQPEESSSPVQLSKILLKLDKSKEDKAEENRRNELLKFLNSSFD
        +K   E  S V   KILLK+DKSKEDKA E++RNELLKFLN+SFD
Subjt:  EKQPEESSSPVQLSKILLKLDKSKEDKAEENRRNELLKFLNSSFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCAATTATAGTAAATAGAATGGAGGCCTTGTTGGGATCTATGAGAGCATGGGACACAGTGGTGTATGAGTTCAAGGAGGAGGAGATGAAGAAGGAGAAGAAGGC
GTTATTCACAATCCACCAAAGAGTAGATGGCACCACGTTTGAGTTGATCGTCCATGCAAAATCTTCTGAGAATGCTTGGGAGAAACAGCCAGAAGAGAGTAGTAGCCCTG
TGCAGCTTTCCAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCAGAGGAAAACAGAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACCAATTATAGTAAATAGAATGGAGGCCTTGTTGGGATCTATGAGAGCATGGGACACAGTGGTGTATGAGTTCAAGGAGGAGGAGATGAAGAAGGAGAAGAAGGC
GTTATTCACAATCCACCAAAGAGTAGATGGCACCACGTTTGAGTTGATCGTCCATGCAAAATCTTCTGAGAATGCTTGGGAGAAACAGCCAGAAGAGAGTAGTAGCCCTG
TGCAGCTTTCCAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCAGAGGAAAACAGAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAATGG
CTGTGTATTAAGAATGGAGGAAAGAGGCATTATTAGCTGCTGCATGGAAAAATTTCAGTTCAATCAACAGTTGTGTGACATTCAAGCCTGTGAACTTTCTTCTCCCTTTG
ATGCTTTGATGTTTGATGCTTTGATGCATATGGATCAAGATCTTGTTTTAATTCCTTATGGACAGGAATTGAAATTGAAATGGAAATGGAAAATGACTTACTTTGTTTGA
TGGGATGGAATGGGATGATGAATGATTGATTGTTAGTTCTTATGATCCGATTGTGTAAAACGCTCAAGCGCTGCCTCCTTGCCAAGGCATTGTTTTTACAATGTTCACTA
AAAAAGTTTCATGACAATCTCTCCATTGCCCTCCTTCCACGCCGTGTTGCAGCTGAGAGACCACTTATGGCAGGAGGAGGGTCGATCTCGTAGGGTTGAGATCGAACCAA
CTGATAGTCGACAAGTGATACTAACATCCAGTGACTATCACGGTCATGTTTATCCAAGACGTGTTGTCCAAGTTGCACGTCCATTACATGCCAAAACTCTTGCCTAGTAA
CTTTATCG
Protein sequenceShow/hide protein sequence
MGPIIVNRMEALLGSMRAWDTVVYEFKEEEMKKEKKALFTIHQRVDGTTFELIVHAKSSENAWEKQPEESSSPVQLSKILLKLDKSKEDKAEENRRNELLKFLNSSFD