; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G012250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G012250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCmo_Chr10:12217493..12221514
RNA-Seq ExpressionCmoCh10G012250
SyntenyCmoCh10G012250
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR029472 - Retrotransposon Copia-like, N-terminal
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1840611.1 unnamed protein product [Ananas comosus var. bracteatus]1.5e-27257.24Show/hide
Query:  KISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKT
        K  ++D + PYY+HHSD+PG+ LVP+KLNGANYQSWSK+++HAL AK K+GFIDG+++ PSQ+   TEF LWNQCNS+I+SWLTHSVE D+A+G+IHAKT
Subjt:  KISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKT

Query:  AHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPL
        A+QVW DL D QFSQKNA AIFQIQ SIAT+SQG+M++++Y+ KLKALWDELE YR P+TCN  + H +Q +ED+LMQ LMGLNESYK VRSNILMM+PL
Subjt:  AHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPL

Query:  PNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTRQVNQHNNHG
        PNVRQAYS ++QE+ QRQ++SE TENF IA+ VQ K   S     K+C+H ++SGH I ECR LK++CKFCD+ GHTEDRCR+KNN     Q N+ +   
Subjt:  PNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTRQVNQHNNHG

Query:  YRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSGLGYGEDDWLGR----DVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIH
         +S+ANMA+ S +N +    N + +FS E L+++A+ALS +N + S    G +D        + K  E      S+S     APSTS     DP  S  +
Subjt:  YRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSGLGYGEDDWLGR----DVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIH

Query:  PPPSIPSPPIPPSPPIPSPTASSSHPPSPTST------TNSNPIPP-----------------------NTSAPL-------------------------
          P   +  +P     P   +S+S PP P         +  +  PP                       NT  PL                         
Subjt:  PPPSIPSPPIPPSPPIPSPTASSSHPPSPTST------TNSNPIPP-----------------------NTSAPL-------------------------

Query:  ------RLGDPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAA
               +  P WQ AM+ E+ AL                                  ERYKARLVAKGYTQ+ G+DY ETFSPTAKL TLRCLL +AAA
Subjt:  ------RLGDPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAA

Query:  RKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLI
        R WFT QLDVQNAFLHGNL E VYM  PPGLRRQGEN+VCRL+KSLYGLKQASRNWFS+ S  +++A ++QSKADYSLFTK +GT FTAVLIYVDDIL+ 
Subjt:  RKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLI

Query:  GNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTV
        GN ++EI  LK  LL+KFLIKDLG L YFLGIEFS S+KGIFMSQRKYALDIL+D+G T +RP+ FPMEQN+KL+LT+ EKL+DP +YRRLI RLIYLTV
Subjt:  GNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTV

Query:  TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAE
        TRPDI Y VR LSQ+MHEPRKPHWEAA+RVL+YIK TPGQGLLLP E NLKL A+CDS+W G RT+RRSIS +CIFL +S+ISWKSKKQTNVSRSSAE E
Subjt:  TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAE

Query:  YRAMANTCLELT
        YR+MANTCLELT
Subjt:  YRAMANTCLELT

RVW69506.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.1e-29459.38Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGLNESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL+VQEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE
         SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH                                       P+GLG+GEDDWLG       
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE

Query:  D-------DFPFSSTSQTLTL---APSTSVVPLH------DPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG---
                   F ST Q ++L   +PS++    H       PS ++  P P  P     P P  PSP++ SS P  P+  +N++   P    PLR     
Subjt:  D-------DFPFSSTSQTLTL---APSTSVVPLH------DPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG---

Query:  ----------------------------------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKG
                                                DP W QAM+ ++ AL                                  ERYKARLVAKG
Subjt:  ----------------------------------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKG

Query:  YTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGY
        YTQV GIDY ETFSPTAKL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++ GY
Subjt:  YTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGY

Query:  TQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPME
         QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQDTGLT  +P+KFPME
Subjt:  TQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPME

Query:  QNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRS
        QNLKL+  + E L+DPS+YRRL+GRLIYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDS+WGG R SRRS
Subjt:  QNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRS

Query:  ISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        +S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  ISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

RVW71032.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.0e-28154.87Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF++GT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGLNESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL++QEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSG----------------------------LGYGEDDW-------------------
         SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH  SG                            L  G  D                    
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSG----------------------------LGYGEDDW-------------------

Query:  ------------------------------------------LGRDVKFCEDDFPFSSTSQTLT-------------------LAPSTSVVPLHDPSYSS
                                                  L +D   C   FP     Q L                    L+  +   P+  P +S 
Subjt:  ------------------------------------------LGRDVKFCEDDFPFSSTSQTLT-------------------LAPSTSVVPLHDPSYSS

Query:  IHPPP---------------SIPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG-----------------------------
           PP                +P P  P     P P  PSP++ SS P  P+  + ++   P    PLR                               
Subjt:  IHPPP---------------SIPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG-----------------------------

Query:  --------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLL
                      DP W+QAM+ E+ AL                                  ERYKARLVAKGYTQV GIDY ETFSPTAKL TLRCLL
Subjt:  --------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLL

Query:  IVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVD
         VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVD
Subjt:  IVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVD

Query:  DILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRL
        DILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQDTGLT A+P+KFPMEQNLKL+    E L+DPS+YRRL+GRL
Subjt:  DILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRL

Query:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRS
        IYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGG R SRRS+S +C+FL +S+ISWKSKKQTNVSRS
Subjt:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRS

Query:  SAEAEYRAMANTCLELT
        SAEAEYRAMANTCLELT
Subjt:  SAEAEYRAMANTCLELT

RVW97878.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]3.3e-27756.64Show/hide
Query:  MAESAK-STFKISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEAD
        MA S K S  +   +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF++GT+EEPSQ+     FE WNQCN+MI+SWLTH+VE+D
Subjt:  MAESAK-STFKISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEAD

Query:  IAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVR
        IA+GIIHAKTA                      + SIATMSQGTMT++ YFTK+KALWDELE YR+  TCNQRQ H++QR+ED+LMQ LMGLNESYK VR
Subjt:  IAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVR

Query:  SNILMMSPLPNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTR
        SNILMMSPLPNVRQAYSL++QEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S    
Subjt:  SNILMMSPLPNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTR

Query:  ---QVNQHNNHGYRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGY
           +  +    G + SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH                                       P+GLG+
Subjt:  ---QVNQHNNHGYRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGY

Query:  GEDDWLGRDVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPS-------YSSIHPPPS----IPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPI
        GEDDWLGR       D P S +     +      +P   PS       ++ +  PPS    +P P  P     P P  PSP++ SS P  P+  + ++  
Subjt:  GEDDWLGRDVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPS-------YSSIHPPPS----IPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPI

Query:  PPNTSAPLRLG-------------------------------------------DPLWQQAMNYEIAAL-------------------------------
         P    PLR                                             DP W+QAM  E+ AL                               
Subjt:  PPNTSAPLRLG-------------------------------------------DPLWQQAMNYEIAAL-------------------------------

Query:  ---ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRN
           ERYKARLVAKGYTQV GIDY ETFSPT+KL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRN
Subjt:  ---ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRN

Query:  WFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQD
        WFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQD
Subjt:  WFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQD

Query:  TGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAY
        TGLT A+P+KFPMEQNLKL+  + E L+DPS+YRRL+GRLIYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+
Subjt:  TGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAY

Query:  CDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        CDSDWGG R SR S+S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  CDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

RVX15598.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.9e-26658.35Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGL+ESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL+VQEEMQRQV+SEPTENF IA+ V +K       + K C+H N+SGH ++ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE
          AN A  SQ  ++  S + I  F++EQ++Q+AQA+ A+NH                                       P+GLG+GEDDWLGR      
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE

Query:  DDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPP--IPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNYEIAAL--
        D   F S    + L   T  VP +  + S  H PP   S     PP+       ++  +  S  S++    I P++       DP W+QAM+ E+ AL  
Subjt:  DDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPP--IPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNYEIAAL--

Query:  --------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMS
                                        ERYKA LVAKGYTQV GIDY ETFSPTAKL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+
Subjt:  --------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMS

Query:  LPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNL
         PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG  
Subjt:  LPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNL

Query:  KYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEA
                                           +P+KFPMEQNLKL+  + E L+DPS+YRRL+GRLIYLT+TR DI Y VR LSQFM+ P+KPHWEA
Subjt:  KYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEA

Query:  ALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        ALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGG R SRRS+S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  ALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

TrEMBL top hitse value%identityAlignment
A0A438GBE7 Retrovirus-related Pol polyprotein from transposon RE12.5e-29459.38Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGLNESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL+VQEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE
         SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH                                       P+GLG+GEDDWLG       
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE

Query:  D-------DFPFSSTSQTLTL---APSTSVVPLH------DPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG---
                   F ST Q ++L   +PS++    H       PS ++  P P  P     P P  PSP++ SS P  P+  +N++   P    PLR     
Subjt:  D-------DFPFSSTSQTLTL---APSTSVVPLH------DPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG---

Query:  ----------------------------------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKG
                                                DP W QAM+ ++ AL                                  ERYKARLVAKG
Subjt:  ----------------------------------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKG

Query:  YTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGY
        YTQV GIDY ETFSPTAKL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++ GY
Subjt:  YTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGY

Query:  TQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPME
         QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQDTGLT  +P+KFPME
Subjt:  TQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPME

Query:  QNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRS
        QNLKL+  + E L+DPS+YRRL+GRLIYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDS+WGG R SRRS
Subjt:  QNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRS

Query:  ISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        +S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  ISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

A0A438GFQ0 Retrovirus-related Pol polyprotein from transposon RE12.4e-28154.87Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF++GT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGLNESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL++QEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSG----------------------------LGYGEDDW-------------------
         SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH  SG                            L  G  D                    
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSG----------------------------LGYGEDDW-------------------

Query:  ------------------------------------------LGRDVKFCEDDFPFSSTSQTLT-------------------LAPSTSVVPLHDPSYSS
                                                  L +D   C   FP     Q L                    L+  +   P+  P +S 
Subjt:  ------------------------------------------LGRDVKFCEDDFPFSSTSQTLT-------------------LAPSTSVVPLHDPSYSS

Query:  IHPPP---------------SIPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG-----------------------------
           PP                +P P  P     P P  PSP++ SS P  P+  + ++   P    PLR                               
Subjt:  IHPPP---------------SIPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLG-----------------------------

Query:  --------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLL
                      DP W+QAM+ E+ AL                                  ERYKARLVAKGYTQV GIDY ETFSPTAKL TLRCLL
Subjt:  --------------DPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLL

Query:  IVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVD
         VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVD
Subjt:  IVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVD

Query:  DILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRL
        DILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQDTGLT A+P+KFPMEQNLKL+    E L+DPS+YRRL+GRL
Subjt:  DILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRL

Query:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRS
        IYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGG R SRRS+S +C+FL +S+ISWKSKKQTNVSRS
Subjt:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRS

Query:  SAEAEYRAMANTCLELT
        SAEAEYRAMANTCLELT
Subjt:  SAEAEYRAMANTCLELT

A0A438IMD1 Retrovirus-related Pol polyprotein from transposon RE11.6e-27756.64Show/hide
Query:  MAESAK-STFKISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEAD
        MA S K S  +   +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF++GT+EEPSQ+     FE WNQCN+MI+SWLTH+VE+D
Subjt:  MAESAK-STFKISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEAD

Query:  IAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVR
        IA+GIIHAKTA                      + SIATMSQGTMT++ YFTK+KALWDELE YR+  TCNQRQ H++QR+ED+LMQ LMGLNESYK VR
Subjt:  IAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVR

Query:  SNILMMSPLPNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTR
        SNILMMSPLPNVRQAYSL++QEEMQRQV+SEPTENF IA+ V  K       + K C+H N+SGH I+ECR LKFHCKFCD+RGHTEDRCR KN S    
Subjt:  SNILMMSPLPNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTR

Query:  ---QVNQHNNHGYRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGY
           +  +    G + SAN A  SQ  ++  S + +  F++EQ++Q+AQA+ A+NH                                       P+GLG+
Subjt:  ---QVNQHNNHGYRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGY

Query:  GEDDWLGRDVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPS-------YSSIHPPPS----IPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPI
        GEDDWLGR       D P S +     +      +P   PS       ++ +  PPS    +P P  P     P P  PSP++ SS P  P+  + ++  
Subjt:  GEDDWLGRDVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPS-------YSSIHPPPS----IPSPPIP-----PSPPIPSPTASSSHPPSPTSTTNSNPI

Query:  PPNTSAPLRLG-------------------------------------------DPLWQQAMNYEIAAL-------------------------------
         P    PLR                                             DP W+QAM  E+ AL                               
Subjt:  PPNTSAPLRLG-------------------------------------------DPLWQQAMNYEIAAL-------------------------------

Query:  ---ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRN
           ERYKARLVAKGYTQV GIDY ETFSPT+KL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+ PPGLRRQGEN+VCRL KS+YGLKQASRN
Subjt:  ---ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRN

Query:  WFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQD
        WFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG LKYFLGIEFS+S+KGIFMSQRKYALDILQD
Subjt:  WFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQD

Query:  TGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAY
        TGLT A+P+KFPMEQNLKL+  + E L+DPS+YRRL+GRLIYLTVTRPDI Y VR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+
Subjt:  TGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAY

Query:  CDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        CDSDWGG R SR S+S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  CDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

A0A438K345 Retrovirus-related Pol polyprotein from transposon RE12.9e-26658.35Show/hide
Query:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSD+PG+ LVPIKLNG NYQSWSK+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTMT++ YFTK+KALWDELE YR+P TCNQRQ H++QR+ED+LMQ LMGL+ESYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR
        AYSL+VQEEMQRQV+SEPTENF IA+ V +K       + K C+H N+SGH ++ECR LKFHCKFCD+RGHTEDRCR KN S  +T Q         G +
Subjt:  AYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNS-GRTRQVNQHN--NHGYR

Query:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE
          AN A  SQ  ++  S + I  F++EQ++Q+AQA+ A+NH                                       P+GLG+GEDDWLGR      
Subjt:  SSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHH--------------------------------------PSGLGYGEDDWLGRDVKFCE

Query:  DDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPP--IPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNYEIAAL--
        D   F S    + L   T  VP +  + S  H PP   S     PP+       ++  +  S  S++    I P++       DP W+QAM+ E+ AL  
Subjt:  DDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPP--IPPSPPIPSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNYEIAAL--

Query:  --------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMS
                                        ERYKA LVAKGYTQV GIDY ETFSPTAKL TLRCLL VAA+R W+ HQLDV NAFLHGNL E+VYM+
Subjt:  --------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMS

Query:  LPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNL
         PPGLRRQGEN+VCRL KS+YGLKQASRNWFS F+ T+++AGY QSKADYSLFTKS+G  FTA+LIYVDDILL GNDL EI+ LKT LL++F IKDLG  
Subjt:  LPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNL

Query:  KYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEA
                                           +P+KFPMEQNLKL+  + E L+DPS+YRRL+GRLIYLT+TR DI Y VR LSQFM+ P+KPHWEA
Subjt:  KYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEA

Query:  ALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT
        ALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGG R SRRS+S +C+FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELT
Subjt:  ALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT

A0A6V7QCA8 Uncharacterized protein7.0e-27357.24Show/hide
Query:  KISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKT
        K  ++D + PYY+HHSD+PG+ LVP+KLNGANYQSWSK+++HAL AK K+GFIDG+++ PSQ+   TEF LWNQCNS+I+SWLTHSVE D+A+G+IHAKT
Subjt:  KISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKT

Query:  AHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPL
        A+QVW DL D QFSQKNA AIFQIQ SIAT+SQG+M++++Y+ KLKALWDELE YR P+TCN  + H +Q +ED+LMQ LMGLNESYK VRSNILMM+PL
Subjt:  AHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPL

Query:  PNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTRQVNQHNNHG
        PNVRQAYS ++QE+ QRQ++SE TENF IA+ VQ K   S     K+C+H ++SGH I ECR LK++CKFCD+ GHTEDRCR+KNN     Q N+ +   
Subjt:  PNVRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTRQVNQHNNHG

Query:  YRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSGLGYGEDDWLGR----DVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIH
         +S+ANMA+ S +N +    N + +FS E L+++A+ALS +N + S    G +D        + K  E      S+S     APSTS     DP  S  +
Subjt:  YRSSANMADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSGLGYGEDDWLGR----DVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIH

Query:  PPPSIPSPPIPPSPPIPSPTASSSHPPSPTST------TNSNPIPP-----------------------NTSAPL-------------------------
          P   +  +P     P   +S+S PP P         +  +  PP                       NT  PL                         
Subjt:  PPPSIPSPPIPPSPPIPSPTASSSHPPSPTST------TNSNPIPP-----------------------NTSAPL-------------------------

Query:  ------RLGDPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAA
               +  P WQ AM+ E+ AL                                  ERYKARLVAKGYTQ+ G+DY ETFSPTAKL TLRCLL +AAA
Subjt:  ------RLGDPLWQQAMNYEIAAL----------------------------------ERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAA

Query:  RKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLI
        R WFT QLDVQNAFLHGNL E VYM  PPGLRRQGEN+VCRL+KSLYGLKQASRNWFS+ S  +++A ++QSKADYSLFTK +GT FTAVLIYVDDIL+ 
Subjt:  RKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLI

Query:  GNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTV
        GN ++EI  LK  LL+KFLIKDLG L YFLGIEFS S+KGIFMSQRKYALDIL+D+G T +RP+ FPMEQN+KL+LT+ EKL+DP +YRRLI RLIYLTV
Subjt:  GNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTV

Query:  TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAE
        TRPDI Y VR LSQ+MHEPRKPHWEAA+RVL+YIK TPGQGLLLP E NLKL A+CDS+W G RT+RRSIS +CIFL +S+ISWKSKKQTNVSRSSAE E
Subjt:  TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAE

Query:  YRAMANTCLELT
        YR+MANTCLELT
Subjt:  YRAMANTCLELT

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.7e-5634.91Show/hide
Query:  TASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNY-EIAALERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQN
        T  ++H  + T T    P   N      + D  W  ++ Y E+    RYKARLVA+G+TQ   IDY ETF+P A++ + R +L +        HQ+DV+ 
Subjt:  TASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNY-EIAALERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQN

Query:  AFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKG--TSFTAVLIYVDDILLIGNDLKEIQYL
        AFL+G L E++YM LP G+    +N VC+L+K++YGLKQA+R WF +F   ++   +  S  D  ++   KG       VL+YVDD+++   D+  +   
Subjt:  AFLHGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKG--TSFTAVLIYVDDILLIGNDLKEIQYL

Query:  KTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLS-LTEREKLNDPSKYRRLIGRLIYLTV-TRPDIAYL
        K  L++KF + DL  +K+F+GI        I++SQ  Y   IL    +        P+   +    L   E  N P   R LIG L+Y+ + TRPD+   
Subjt:  KTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLS-LTEREKLNDPSKYRRLIGRLIYLTV-TRPDIAYL

Query:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLL----LPSENNLKLQAYCDSDWGGFRTSRRSISRFCI-FLENSIISWKSKKQTNVSRSSAEAEYRA
        V +LS++  +     W+   RVLRY+KGT    L+    L  EN  K+  Y DSDW G    R+S + +     + ++I W +K+Q +V+ SS EAEY A
Subjt:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLL----LPSENNLKLQAYCDSDWGGFRTSRRSISRFCI-FLENSIISWKSKKQTNVSRSSAEAEYRA

Query:  M
        +
Subjt:  M

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.7e-6239.18Show/hide
Query:  LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQG-ENIVCRLHKSLYGLKQASRNW
        L RYKARLV KG+ Q +GID+ E FSP  K+ ++R +L +AA+      QLDV+ AFLHG+L+E++YM  P G    G +++VC+L+KSLYGLKQA R W
Subjt:  LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPGLRRQG-ENIVCRLHKSLYGLKQASRNW

Query:  FSIFSTTIQNAGYTQSKADYSL-FTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSR--KGIFMSQRKYALDIL
        +  F + +++  Y ++ +D  + F +    +F  +L+YVDD+L++G D   I  LK  L + F +KDLG  +  LG++  + R  + +++SQ KY   +L
Subjt:  FSIFSTTIQNAGYTQSKADYSL-FTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSR--KGIFMSQRKYALDIL

Query:  QDTGLTEARPDKFPMEQNLKLS-----LTEREKLNDPS-KYRRLIGRLIYLTV-TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPS
        +   +  A+P   P+  +LKLS      T  EK N     Y   +G L+Y  V TRPDIA+ V ++S+F+  P K HWEA   +LRY++GT G  L    
Subjt:  QDTGLTEARPDKFPMEQNLKLS-----LTEREKLNDPS-KYRRLIGRLIYLTV-TRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPS

Query:  ENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL
         + + L+ Y D+D  G   +R+S + +        ISW+SK Q  V+ S+ EAEY A   T  E+
Subjt:  ENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL

P92519 Uncharacterized mitochondrial protein AtMg008109.4e-4946.64Show/hide
Query:  VLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYR
        +L+YVDDILL G+    +  L   L   F +KDLG + YFLGI+      G+F+SQ KYA  IL + G+ + +P   P+   L  S++   K  DPS +R
Subjt:  VLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYR

Query:  RLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQ
         ++G L YLT+TRPDI+Y V ++ Q MHEP    ++   RVLRY+KGT   GL +   + L +QA+CDSDW G  ++RRS + FC FL  +IISW +K+Q
Subjt:  RLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQ

Query:  TNVSRSSAEAEYRAMANTCLELT
          VSRSS E EYRA+A T  ELT
Subjt:  TNVSRSSAEAEYRAMANTCLELT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-8240.8Show/hide
Query:  SSTSQTL-TLAPSTSVVPLHDPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNP----IPPNTSAPL---------------RLGDPLW
        S  +Q+L T A S+S  P    S SS    P+ PS  I P PP+     +++  P  T +  +      I PN    L                L D  W
Subjt:  SSTSQTL-TLAPSTSVVPLHDPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNP----IPPNTSAPL---------------RLGDPLW

Query:  QQAMNYEIAA-----------------------------------LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQN
        + AM  EI A                                   L RYKARLVAKGY Q  G+DY ETFSP  K  ++R +L VA  R W   QLDV N
Subjt:  QQAMNYEIAA-----------------------------------LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQN

Query:  AFLHGNLDEKVYMSLPPG-LRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLK
        AFL G L + VYMS PPG + +   N VC+L K+LYGLKQA R W+      +   G+  S +D SLF   +G S   +L+YVDDIL+ GND   +    
Subjt:  AFLHGNLDEKVYMSLPPG-LRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLK

Query:  TSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRM
         +L Q+F +KD   L YFLGIE  +   G+ +SQR+Y LD+L  T +  A+P   PM  + KLSL    KL DP++YR ++G L YL  TRPDI+Y V  
Subjt:  TSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRM

Query:  LSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL
        LSQFMH P + H +A  R+LRY+ GTP  G+ L   N L L AY D+DW G +    S + + ++L +  ISW SKKQ  V RSS EAEYR++ANT  E+
Subjt:  LSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-8540.96Show/hide
Query:  PFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPI-PPN---------------TSAPLRLGDPLWQQ
        P S  S      PSTS+   + PS SS   P   P PP+ P+PPI    A +       +T   + I  PN                +A   + D  W+Q
Subjt:  PFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPPIPPSPPIPSPTASSSHPPSPTSTTNSNPI-PPN---------------TSAPLRLGDPLWQQ

Query:  AMNYEIAA-----------------------------------LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAF
        AM  EI A                                   L RYKARLVAKGY Q  G+DY ETFSP  K  ++R +L VA  R W   QLDV NAF
Subjt:  AMNYEIAA-----------------------------------LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAF

Query:  LHGNLDEKVYMSLPPG-LRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTS
        L G L ++VYMS PPG + +   + VCRL K++YGLKQA R W+    T +   G+  S +D SLF   +G S   +L+YVDDIL+ GND   +++   +
Subjt:  LHGNLDEKVYMSLPPG-LRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTS

Query:  LLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLS
        L Q+F +K+  +L YFLGIE  +  +G+ +SQR+Y LD+L  T +  A+P   PM  + KL+L    KL DP++YR ++G L YL  TRPD++Y V  LS
Subjt:  LLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLS

Query:  QFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL
        Q+MH P   HW A  RVLRY+ GTP  G+ L   N L L AY D+DW G      S + + ++L +  ISW SKKQ  V RSS EAEYR++ANT  EL
Subjt:  QFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLEL

Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.7e-2731.49Show/hide
Query:  MAESAKSTFKISDVDLTHPYY----IHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSV
        MAE+ KS    SD D   PYY    IHH  +  +S+  +  +  NY +W       L   KK GFIDGT+ +P  D  S  ++ W QCN+M++ WL +S+
Subjt:  MAESAKSTFKISDVDLTHPYY----IHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSV

Query:  EADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRT-------PFTCNQRQIHIDQRKEDKLMQLLM
           + + +++A+TAH++W DL   F     L I+Q++  +AT+ QG  ++  YF KL  +W EL  Y            C   +   + R++++  + LM
Subjt:  EADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRT-------PFTCNQRQIHIDQRKEDKLMQLLM

Query:  G--LNESYKTVRSNILMMSPLPNVRQAYSLLVQEE
        G  LN+ ++ V + I+   P P++ +A++++   E
Subjt:  G--LNESYKTVRSNILMMSPLPNVRQAYSLLVQEE

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-9649.59Show/hide
Query:  WQQAMNYEI-AALERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPG-LRRQGE----NIVC
        W   + Y     +ERYKARLVAKGYTQ EGID+ ETFSP  KL +++ +L ++A   +  HQLD+ NAFL+G+LDE++YM LPPG   RQG+    N VC
Subjt:  WQQAMNYEI-AALERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFLHGNLDEKVYMSLPPG-LRRQGE----NIVC

Query:  RLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKG
         L KS+YGLKQASR WF  FS T+   G+ QS +D++ F K   T F  VL+YVDDI++  N+   +  LK+ L   F ++DLG LKYFLG+E ++S  G
Subjt:  RLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKG

Query:  IFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
        I + QRKYALD+L +TGL   +P   PM+ ++  S        D   YRRLIGRL+YL +TR DI++ V  LSQF   PR  H +A +++L YIKGT GQ
Subjt:  IFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ

Query:  GLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMA
        GL   S+  ++LQ + D+ +   + +RRS + +C+FL  S+ISWKSKKQ  VS+SSAEAEYRA++
Subjt:  GLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMA

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.4e-1545.57Show/hide
Query:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFC
        +YLT+TRPD+ + V  LSQF    R    +A  +VL Y+KGT GQGL   + ++L+L+A+ DSDW     +RRS++ FC
Subjt:  IYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFC

ATMG00810.1 DNA/RNA polymerases superfamily protein6.7e-5046.64Show/hide
Query:  VLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYR
        +L+YVDDILL G+    +  L   L   F +KDLG + YFLGI+      G+F+SQ KYA  IL + G+ + +P   P+   L  S++   K  DPS +R
Subjt:  VLIYVDDILLIGNDLKEIQYLKTSLLQKFLIKDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYR

Query:  RLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQ
         ++G L YLT+TRPDI+Y V ++ Q MHEP    ++   RVLRY+KGT   GL +   + L +QA+CDSDW G  ++RRS + FC FL  +IISW +K+Q
Subjt:  RLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQ

Query:  TNVSRSSAEAEYRAMANTCLELT
          VSRSS E EYRA+A T  ELT
Subjt:  TNVSRSSAEAEYRAMANTCLELT

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.0e-0556.1Show/hide
Query:  LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVA
        L+R KARLVAKG+ Q EGI + ET+SP  +  T+R +L VA
Subjt:  LERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAGCCAAATCCACCTTCAAAATTTCGGATGTTGATTTAACACACCCTTACTATATTCATCACTCTGATGAGCCAGGATATTCACTTGTTCCAATC
AAATTAAATGGAGCAAATTACCAATCCTGGAGTAAATCAGTTATGCATGCTCTTATTGCCAAGAAGAAAATTGGCTTCATTGATGGCACAATTGAAGAACCGTCC
CAAGATGCAAATTCAACCGAATTTGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAACTCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATT
CACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTTTTCAGATACAAAACTCGATAGCAACGATGTCA
CAAGGAACCATGACACTGTCAACATATTTCACCAAGCTCAAAGCACTCTGGGATGAATTGGAAGCGTACCGCACACCATTTACCTGTAATCAACGTCAAATACAT
ATTGATCAACGCAAAGAAGACAAGTTGATGCAATTGCTCATGGGGCTCAATGAGTCTTATAAAACGGTGAGATCTAACATATTGATGATGTCTCCATTACCTAAT
GTGAGGCAAGCCTATTCATTACTTGTACAAGAAGAGATGCAACGTCAGGTAACTTCTGAACCTACTGAGAATTTCTTGATTGCATCAACAGTGCAGAAGAAAACA
ACATATTCAAAATTCGCCAAGGACAAATCGTGTGAACACTACAATAAAAGTGGTCATATAATCAATGAGTGTCGAATTCTCAAGTTTCACTGTAAGTTTTGTGAT
AGAAGGGGACATACAGAAGATCGGTGTCGACAGAAAAATAATTCTGGAAGGACAAGACAAGTCAATCAACACAATAATCATGGATATCGATCATCTGCAAATATG
GCCGATGTTTCTCAGTTGAATACAGAAGAACAGTCACCTAATTTCATTCCAAATTTTTCTTCTGAGCAATTACGACAGATAGCACAAGCCTTATCTGCAATCAAT
CATCACCCTTCTGGACTTGGCTACGGGGAAGATGATTGGCTCGGCCGTGATGTTAAATTTTGTGAAGATGATTTTCCTTTTTCATCAACTTCACAAACTTTGACA
TTAGCTCCTTCGACTTCTGTTGTACCACTTCATGATCCATCCTACTCAAGCATCCATCCTCCACCTTCTATTCCTTCACCTCCTATTCCTCCTTCACCTCCTATC
CCTTCGCCTACTGCTTCTTCGTCTCATCCACCTTCTCCAACTTCGACCACTAATTCTAATCCTATCCCACCTAATACATCAGCTCCACTCCGACTTGGCGACCCG
TTATGGCAGCAGGCTATGAATTATGAAATTGCAGCTTTGGAACGTTATAAAGCTCGACTTGTAGCAAAGGGATACACTCAAGTTGAAGGTATTGATTACACAGAA
ACATTTTCCCCTACAGCGAAACTTATTACACTTCGTTGCTTACTCATTGTTGCTGCTGCTCGAAAATGGTTCACCCATCAATTGGATGTTCAAAATGCCTTTCTC
CATGGTAATCTAGACGAGAAAGTTTATATGTCTTTACCACCAGGTCTTCGCCGACAGGGGGAGAATATAGTATGCCGGCTCCATAAATCTCTTTATGGATTAAAA
CAAGCTTCTCGCAATTGGTTCTCCATATTTTCTACAACTATACAAAATGCAGGCTACACTCAGTCCAAAGCAGATTACTCTTTATTTACTAAGAGTAAAGGTACT
TCTTTCACTGCAGTTCTAATCTATGTTGATGATATTCTATTGATAGGCAATGATCTCAAAGAAATTCAATATCTCAAGACTAGTTTACTCCAGAAATTTCTTATC
AAAGATTTAGGAAATTTGAAATATTTTCTAGGCATTGAATTTTCTCAGTCTAGAAAAGGAATTTTTATGTCTCAAAGGAAGTATGCTCTAGACATTCTTCAAGAC
ACAGGTCTTACAGAAGCACGTCCAGACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACTGAAAGAGAGAAGTTGAATGATCCAAGTAAATACAGACGG
TTGATTGGCAGATTAATATATTTGACCGTCACTAGGCCTGACATAGCTTATTTAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAG
GCAGCTCTTCGAGTTCTGAGGTACATCAAAGGCACTCCTGGTCAAGGACTCCTACTGCCATCTGAAAACAATTTAAAATTACAAGCATATTGCGATTCTGATTGG
GGCGGTTTTCGAACTTCCAGACGGTCTATTTCTAGGTTCTGCATTTTTCTCGAAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCA
TCAGCAGAAGCCGAGTATCGAGCTATGGCAAATACTTGTTTAGAGTTAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCAGCCAAATCCACCTTCAAAATTTCGGATGTTGATTTAACACACCCTTACTATATTCATCACTCTGATGAGCCAGGATATTCACTTGTTCCAATC
AAATTAAATGGAGCAAATTACCAATCCTGGAGTAAATCAGTTATGCATGCTCTTATTGCCAAGAAGAAAATTGGCTTCATTGATGGCACAATTGAAGAACCGTCC
CAAGATGCAAATTCAACCGAATTTGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAACTCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATT
CACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTTTTCAGATACAAAACTCGATAGCAACGATGTCA
CAAGGAACCATGACACTGTCAACATATTTCACCAAGCTCAAAGCACTCTGGGATGAATTGGAAGCGTACCGCACACCATTTACCTGTAATCAACGTCAAATACAT
ATTGATCAACGCAAAGAAGACAAGTTGATGCAATTGCTCATGGGGCTCAATGAGTCTTATAAAACGGTGAGATCTAACATATTGATGATGTCTCCATTACCTAAT
GTGAGGCAAGCCTATTCATTACTTGTACAAGAAGAGATGCAACGTCAGGTAACTTCTGAACCTACTGAGAATTTCTTGATTGCATCAACAGTGCAGAAGAAAACA
ACATATTCAAAATTCGCCAAGGACAAATCGTGTGAACACTACAATAAAAGTGGTCATATAATCAATGAGTGTCGAATTCTCAAGTTTCACTGTAAGTTTTGTGAT
AGAAGGGGACATACAGAAGATCGGTGTCGACAGAAAAATAATTCTGGAAGGACAAGACAAGTCAATCAACACAATAATCATGGATATCGATCATCTGCAAATATG
GCCGATGTTTCTCAGTTGAATACAGAAGAACAGTCACCTAATTTCATTCCAAATTTTTCTTCTGAGCAATTACGACAGATAGCACAAGCCTTATCTGCAATCAAT
CATCACCCTTCTGGACTTGGCTACGGGGAAGATGATTGGCTCGGCCGTGATGTTAAATTTTGTGAAGATGATTTTCCTTTTTCATCAACTTCACAAACTTTGACA
TTAGCTCCTTCGACTTCTGTTGTACCACTTCATGATCCATCCTACTCAAGCATCCATCCTCCACCTTCTATTCCTTCACCTCCTATTCCTCCTTCACCTCCTATC
CCTTCGCCTACTGCTTCTTCGTCTCATCCACCTTCTCCAACTTCGACCACTAATTCTAATCCTATCCCACCTAATACATCAGCTCCACTCCGACTTGGCGACCCG
TTATGGCAGCAGGCTATGAATTATGAAATTGCAGCTTTGGAACGTTATAAAGCTCGACTTGTAGCAAAGGGATACACTCAAGTTGAAGGTATTGATTACACAGAA
ACATTTTCCCCTACAGCGAAACTTATTACACTTCGTTGCTTACTCATTGTTGCTGCTGCTCGAAAATGGTTCACCCATCAATTGGATGTTCAAAATGCCTTTCTC
CATGGTAATCTAGACGAGAAAGTTTATATGTCTTTACCACCAGGTCTTCGCCGACAGGGGGAGAATATAGTATGCCGGCTCCATAAATCTCTTTATGGATTAAAA
CAAGCTTCTCGCAATTGGTTCTCCATATTTTCTACAACTATACAAAATGCAGGCTACACTCAGTCCAAAGCAGATTACTCTTTATTTACTAAGAGTAAAGGTACT
TCTTTCACTGCAGTTCTAATCTATGTTGATGATATTCTATTGATAGGCAATGATCTCAAAGAAATTCAATATCTCAAGACTAGTTTACTCCAGAAATTTCTTATC
AAAGATTTAGGAAATTTGAAATATTTTCTAGGCATTGAATTTTCTCAGTCTAGAAAAGGAATTTTTATGTCTCAAAGGAAGTATGCTCTAGACATTCTTCAAGAC
ACAGGTCTTACAGAAGCACGTCCAGACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACTGAAAGAGAGAAGTTGAATGATCCAAGTAAATACAGACGG
TTGATTGGCAGATTAATATATTTGACCGTCACTAGGCCTGACATAGCTTATTTAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAG
GCAGCTCTTCGAGTTCTGAGGTACATCAAAGGCACTCCTGGTCAAGGACTCCTACTGCCATCTGAAAACAATTTAAAATTACAAGCATATTGCGATTCTGATTGG
GGCGGTTTTCGAACTTCCAGACGGTCTATTTCTAGGTTCTGCATTTTTCTCGAAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCA
TCAGCAGAAGCCGAGTATCGAGCTATGGCAAATACTTGTTTAGAGTTAACTTGA
Protein sequenceShow/hide protein sequence
MAESAKSTFKISDVDLTHPYYIHHSDEPGYSLVPIKLNGANYQSWSKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGII
HAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMTLSTYFTKLKALWDELEAYRTPFTCNQRQIHIDQRKEDKLMQLLMGLNESYKTVRSNILMMSPLPN
VRQAYSLLVQEEMQRQVTSEPTENFLIASTVQKKTTYSKFAKDKSCEHYNKSGHIINECRILKFHCKFCDRRGHTEDRCRQKNNSGRTRQVNQHNNHGYRSSANM
ADVSQLNTEEQSPNFIPNFSSEQLRQIAQALSAINHHPSGLGYGEDDWLGRDVKFCEDDFPFSSTSQTLTLAPSTSVVPLHDPSYSSIHPPPSIPSPPIPPSPPI
PSPTASSSHPPSPTSTTNSNPIPPNTSAPLRLGDPLWQQAMNYEIAALERYKARLVAKGYTQVEGIDYTETFSPTAKLITLRCLLIVAAARKWFTHQLDVQNAFL
HGNLDEKVYMSLPPGLRRQGENIVCRLHKSLYGLKQASRNWFSIFSTTIQNAGYTQSKADYSLFTKSKGTSFTAVLIYVDDILLIGNDLKEIQYLKTSLLQKFLI
KDLGNLKYFLGIEFSQSRKGIFMSQRKYALDILQDTGLTEARPDKFPMEQNLKLSLTEREKLNDPSKYRRLIGRLIYLTVTRPDIAYLVRMLSQFMHEPRKPHWE
AALRVLRYIKGTPGQGLLLPSENNLKLQAYCDSDWGGFRTSRRSISRFCIFLENSIISWKSKKQTNVSRSSAEAEYRAMANTCLELT