CuGenDBv2

Gene ID	CmoCh10G012430
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	IGR domain-containing protein
Genome location	Cmo_Chr10:12535413..12541394
RNA-Seq Expression	CmoCh10G012430
Synteny	CmoCh10G012430
Gene Ontology terms	NA
InterPro domains	IPR019083 - IGR protein motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6590496.1 hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-52

97.22

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRS LQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA

KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-52

97.22

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRS LQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA

XP_022961412.1 uncharacterized protein LOC111461991 [Cucurbita moschata]

2.7e-54

100

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA

XP_022968823.1 uncharacterized protein LOC111467943 [Cucurbita maxima]

2.6e-52

98.13

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIISNHRS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALK
        PRSDALK
Subjt:  PRSDALK

XP_023516779.1 uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo]

2.3e-53

99.07

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIISNHRS LQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M1A4 IGR domain-containing protein

2.6e-50

91.67

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWR I+SNHRS LQPYSAPLFARFFSKS PY+VKVGIPEFL G+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR D+LKA
Subjt:  PRSDALKA

A0A1S3BPD9 uncharacterized protein LOC103492108

1.7e-49

90.74

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAW+ IISNHRS LQPYSA LFARFFSKS PY+VKVGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR D+LK+
Subjt:  PRSDALKA

A0A6J1DML5 uncharacterized protein LOC111021823

1.3e-49

91.67

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SN+RS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR+D++KA
Subjt:  PRSDALKA

A0A6J1HA49 uncharacterized protein LOC111461991

1.3e-54

100

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA

A0A6J1HZ75 uncharacterized protein LOC111467943

1.2e-52

98.13

Show/hide

Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIISNHRS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALK
        PRSDALK
Subjt:  PRSDALK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05810.1 FUNCTIONS IN: molecular_function unknown

7.5e-34

64.29

Show/hide

Query:  MAWRQIISNHRSKL---QPYSAPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        MAW ++I + R+ L   Q  S     RF  SK   Y VKVGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  KYRL
Subjt:  MAWRQIISNHRSKL---QPYSAPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDALKA
        GLW+PR+DA+KA
Subjt:  GLWRPRSDALKA

AT5G26800.1 FUNCTIONS IN: molecular_function unknown

1.1e-37

69.64

Show/hide

Query:  MAWRQIISNHRSKL--QPYSAPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        MAW ++I + RS L   P S+ L F RF+SKS  PY VKVGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY+HKYRL
Subjt:  MAWRQIISNHRSKL--QPYSAPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDALKA
        GLW+PR+DA+KA
Subjt:  GLWRPRSDALKA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTAAACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATACGTCGTGAAGGTCGG
GATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGC
TGAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGA

mRNA sequence

Show/hide mRNA sequence

CTACCCGTCTTCATCTTCGTTGTTTCTTTCCATCTCCCATTTTTGCCACTCGCCGGAACGCCTCCACCACCACGCTGCTTCAGCCTCTCACTGTCACGCCAACTACTGTC
TTCTGCTGCATTCCCTTCAGCTATTGTTCTCTCACCGTCGAGCAAGAAGGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTAAACTGCAACCATACTCAGCTCCT
TTATTTGCTAGATTCTTTTCAAAATCTATCCCATACGTCGTGAAGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGA
ATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGCTGAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGT
ACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGATGGGTTTAGCTATGTTTACGAGGTGAATGGAATTGTTAGCTGATCCTCGGACCTCAGTTTGTA
GAACTTTGAAGGATAGCATTTCATTTTCTAAATCTAAAGCATATCCTTATTTTGCTGCTTTTGAATTGTTTCTATTCATTTACTAACTATATACGCATTCAGTTCATTTA
AGATCATGCATGAATCTTAAATCTAAGTAAACTGAGAGTTCAAATTTATATCATCTGCATGACCGGAA

Protein sequence

Show/hide protein sequence

MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA

CmoCh10G012430 (gene) of Cucurbita moschata (Rifu) v1 genome