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CmoCh10G012570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G012570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionincreased DNA methylation 1-like
Genome locationCmo_Chr10:12840563..12841511
RNA-Seq ExpressionCmoCh10G012570
SyntenyCmoCh10G012570
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574983.1 Imidazoleglycerol-phosphate dehydratase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.7e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDE+LLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDDDLINRMDV
Subjt:  NDDDLINRMDV

KAG7013556.1 Increased DNA methylation 1 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDE+LLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDDDLINRMDV
Subjt:  NDDDLINRMDV

XP_022959072.1 increased DNA methylation 1-like [Cucurbita moschata]2.8e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDE+LLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDDDLINRMDV
Subjt:  NDDDLINRMDV

XP_023006126.1 increased DNA methylation 1-like isoform X1 [Cucurbita maxima]4.8e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDEVLLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        N+DDLINRMDV
Subjt:  NDDDLINRMDV

XP_023006128.1 increased DNA methylation 1-like isoform X2 [Cucurbita maxima]4.8e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDEVLLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        N+DDLINRMDV
Subjt:  NDDDLINRMDV

TrEMBL top hitse value%identityAlignment
A0A1S3BHC4 uncharacterized protein LOC1034896657.0e-3978.38Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DG GGAG+SGSRL+NAK+EKKRPRLVLSDSGSSDEVLLP+RR+VGPETIRVCNGLNSFGKDV+D SGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDD LINRMDV
Subjt:  NDDDLINRMDV

A0A5A7TCY1 Increased DNA methylation 1-like isoform X17.0e-3978.38Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DG GGAG+SGSRL+NAK+EKKRPRLVLSDSGSSDEVLLP+RR+VGPETIRVCNGLNSFGKDV+D SGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDD LINRMDV
Subjt:  NDDDLINRMDV

A0A6J1H3J7 increased DNA methylation 1-like1.4e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDE+LLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        NDDDLINRMDV
Subjt:  NDDDLINRMDV

A0A6J1KWX3 increased DNA methylation 1-like isoform X12.3e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDEVLLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        N+DDLINRMDV
Subjt:  NDDDLINRMDV

A0A6J1L429 increased DNA methylation 1-like isoform X22.3e-4283.78Show/hide
Query:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR
        S  L  T N    L V+   DGFGGAGASGSRLVNAK+EKKRPRLVLSDSGSSDEVLLPHRR+VGPETIRVCNGLNSFGKDVMDESGSI KKDRLQYVKR
Subjt:  SAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKR

Query:  NDDDLINRMDV
        N+DDLINRMDV
Subjt:  NDDDLINRMDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTGCTGCATTGGCCTCCACCATGAATGAAGTTCAGAGGCTCAAGGTTCAGCTGAACATGGATGGGTTTGGAGGCGCTGGGGCTTCGGGGTCCCGTTTGGTTAA
TGCAAAGAGGGAGAAGAAGAGGCCTAGGTTGGTTTTAAGTGATTCTGGGTCAAGTGATGAGGTATTGCTGCCGCATCGCAGACAGGTTGGTCCTGAAACCATTCGGGTTT
GTAATGGTTTGAATTCTTTTGGGAAGGATGTTATGGACGAGAGTGGAAGTATCATAAAGAAGGATAGGTTGCAATACGTTAAGCGGAATGATGATGATTTAATCAACCGG
ATGGATGTTATGGACCTTGTTATGGACCTTAGAGGTTTTTTATTTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTGCTGCATTGGCCTCCACCATGAATGAAGTTCAGAGGCTCAAGGTTCAGCTGAACATGGATGGGTTTGGAGGCGCTGGGGCTTCGGGGTCCCGTTTGGTTAA
TGCAAAGAGGGAGAAGAAGAGGCCTAGGTTGGTTTTAAGTGATTCTGGGTCAAGTGATGAGGTATTGCTGCCGCATCGCAGACAGGTTGGTCCTGAAACCATTCGGGTTT
GTAATGGTTTGAATTCTTTTGGGAAGGATGTTATGGACGAGAGTGGAAGTATCATAAAGAAGGATAGGTTGCAATACGTTAAGCGGAATGATGATGATTTAATCAACCGG
ATGGATGTTATGGACCTTGTTATGGACCTTAGAGGTTTTTTATTTCAATGA
Protein sequenceShow/hide protein sequence
MDSAALASTMNEVQRLKVQLNMDGFGGAGASGSRLVNAKREKKRPRLVLSDSGSSDEVLLPHRRQVGPETIRVCNGLNSFGKDVMDESGSIIKKDRLQYVKRNDDDLINR
MDVMDLVMDLRGFLFQ