CuGenDBv2

Gene ID	CmoCh11G002030
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein Asterix-like
Genome location	Cmo_Chr11:1002369..1006024
RNA-Seq Expression	CmoCh11G002030
Synteny	CmoCh11G002030
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0045048 - protein insertion into ER membrane (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005351 - PAT complex subunit Asterix

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]

6.1e-48

100

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_008453260.1 PREDICTED: protein Asterix [Cucumis melo]

5.7e-46

96.04

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_022921505.1 protein Asterix-like [Cucurbita moschata]

9.8e-46

96.04

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSP VNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL P RPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_022933634.1 protein Asterix-like [Cucurbita moschata]

6.1e-48

100

Show/hide

Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_038880376.1 protein Asterix [Benincasa hispida]

4.0e-47

98.02

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSF0 Uncharacterized protein

1.1e-45

95.05

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG K
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A1S3BWL0 protein Asterix

2.8e-46

96.04

Show/hide

Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1E5Z1 protein Asterix-like

4.7e-46

96.04

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSP VNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL P RPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1F0A5 protein Asterix-like

3.0e-48

100

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1KYK4 protein Asterix-like

3.0e-48

100

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Query:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

SwissProt top hits

e value

%identity

Alignment

Q09993 Protein Asterix

1.9e-04

32.67

Show/hide

Query:  QANDPRQPSAA---KPFVSPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPAR
        Q  DPR+ +     KP  S A   Q +  D    Y   + ++F + G+M R K  SWLA++    S AN R   +D KQI  + M ++  +V +YL    
Subjt:  QANDPRQPSAA---KPFVSPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPAR

Query:  P
        P
Subjt:  P

Q9SD88 Protein Asterix

4.9e-40

79.8

Show/hide

Query:  STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Arabidopsis top hits

e value

%identity

Alignment

AT5G07960.1 unknown protein

3.5e-41

79.8

Show/hide

Query:  STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Sequences

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CDS sequence

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ATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCTTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGT
AGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCTATCATATTCTGCGCTCAATCGCTTGCGAATATGAGGAACATGGAGAACGATCTCA
AGCAGATTTCCATGGCTATGATGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGTCCTGCACGACCAGGAACAAAGAGTTGA

mRNA sequence

Show/hide mRNA sequence

TCGACACTTGAGAACGAGTCTAGAGATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCTTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCG
TCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCTATCATATTCTGCGCTCAATCGCTTGCGAAT
ATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGTCCTGCACGACCAGGAACAAAGAGTTG
AGACTCCTCGCTCAGAATGGTTCTGATGTATTTCCTTTTTTTTTTTTTTTTTTTTTCCTCCTCGGCTTAATCTAAGTTAGGATCTTTTTATGGTTGGTGACTCCTTTTTA
TATTATGTTTTTAAAGAAGAATGTTGGCCGACAGTATTCCAGAGGAAAGTGACTAGATTACTCTTCCCATCCAGTAGTAGATACATAGTGTGGAGCTGAGTGAGACGCTA
CAATAAATAGAATTTTCTTCAGCATCCATATTTACTTGAATCCCAAACCTCTTTCTGAATATTAGTTTTCCAAATGGCCACAGGGTGGCTTAAAGATCCAATGATTCCGA
AAATTGTGGTGGCCAAACTTGCGTATAACTCAACTAGCTAATACATTTATCATTAACTTGAAGGAGGTGGAGTGGTCAAGCCTTTAGATTGGTTTGGGTTAAACTGGCT

Protein sequence

Show/hide protein sequence

MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS

CmoCh11G002030 (gene) of Cucurbita moschata (Rifu) v1 genome