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CmoCh11G002390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G002390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SOB FIVE-LIKE 3-like
Genome locationCmo_Chr11:1199017..1199409
RNA-Seq ExpressionCmoCh11G002390
SyntenyCmoCh11G002390
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021577.1 hypothetical protein SDJN02_15303, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-57100Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSK
        EKLVLVGQKPKSSAQSSSK
Subjt:  EKLVLVGQKPKSSAQSSSK

XP_022135291.1 uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]3.4e-3560.9Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH----------
        ME SQ  GV+EECHSSESGWTMYIGSP   SSD D       D+  +  ++   + N+QD+SDDSMASDASSGPSHQ  HPFGG+G +K+          
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH----------

Query:  ----------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
                  +KPLMEK RAERKEVKEKLVLVGQKPK+S QSSSKVRKSIWMGK+N
Subjt:  ----------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

XP_022933470.1 uncharacterized protein LOC111440875 [Cucurbita moschata]6.0e-64100Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
        EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
Subjt:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

XP_022974149.1 uncharacterized protein LOC111472737 [Cucurbita maxima]1.1e-6095.38Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDED+DVEYGKN+ FHANHQDDSDDSMASDASSGPSHQPDHPF GHGSMKHQKPLMEKHRAERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
        +KLVLVGQKPKSS QSSSKVRKSIWMGKRN
Subjt:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

XP_023531634.1 uncharacterized protein LOC111793816 [Cucurbita pepo subsp. pepo]3.6e-6196.15Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKN+ FHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPL+EKHR ERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
        EKLVLVGQKPKSS QSSSKVRKSIWMGKRN
Subjt:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

TrEMBL top hitse value%identityAlignment
A0A6J1C092 uncharacterized protein LOC111007289 isoform X11.7e-3560.9Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH----------
        ME SQ  GV+EECHSSESGWTMYIGSP   SSD D       D+  +  ++   + N+QD+SDDSMASDASSGPSHQ  HPFGG+G +K+          
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH----------

Query:  ----------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
                  +KPLMEK RAERKEVKEKLVLVGQKPK+S QSSSKVRKSIWMGK+N
Subjt:  ----------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

A0A6J1C2A7 uncharacterized protein LOC111007289 isoform X23.5e-3361.22Show/hide
Query:  SEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH-------------------
        SEECHSSESGWTMYIGSP   SSD D       D+  +  ++   + N+QD+SDDSMASDASSGPSHQ  HPFGG+G +K+                   
Subjt:  SEECHSSESGWTMYIGSPVDDSSDGDE------DNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH-------------------

Query:  -QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
         +KPLMEK RAERKEVKEKLVLVGQKPK+S QSSSKVRKSIWMGK+N
Subjt:  -QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

A0A6J1F4Z3 uncharacterized protein LOC1114408752.9e-64100Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
        EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
Subjt:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

A0A6J1IGR2 uncharacterized protein LOC1114727375.1e-6195.38Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK
        MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDED+DVEYGKN+ FHANHQDDSDDSMASDASSGPSHQPDHPF GHGSMKHQKPLMEKHRAERKEVK
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVK

Query:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
        +KLVLVGQKPKSS QSSSKVRKSIWMGKRN
Subjt:  EKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

A0A6J1JBQ3 uncharacterized protein LOC111485335 isoform X31.3e-2454.72Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSP--VDDSSDGDED--NDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQP-DHPFGGHGSMKH-----------
        ME SQ  GVSEECHSSESGWTMYIGSP   D SSD D    +D E  +++ ++  +QDDSDDSMASDASSGPSHQ   HPFGG  +  H           
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSP--VDDSSDGDED--NDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQP-DHPFGGHGSMKH-----------

Query:  -------------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN
                     +KPL +K RAERKEVKE        PKSS QSSSK RKSIWMGKR+
Subjt:  -------------QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGKRN

SwissProt top hitse value%identityAlignment
F4J6N7 Protein SOB FIVE-LIKE 35.6e-0435.94Show/hide
Query:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYG----KNRVFHANHQD---DSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPL---------MEKHRA
        EEC SSESGWT YI S +++  +   D     G    K+R  +AN  +   DSDDSMASDASSGPS+   H     G  +    L         +  HR 
Subjt:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYG----KNRVFHANHQD---DSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPL---------MEKHRA

Query:  ERKEVKEKLVLVGQKPKSSAQSSSKVRK
        + K +   +    +K KS  +S S  +K
Subjt:  ERKEVKEKLVLVGQKPKSSAQSSSKVRK

Q9FKQ9 Protein SOB FIVE-LIKE 41.6e-0647.22Show/hide
Query:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFH----ANHQD----DSDDSMASDASSGPSHQPDH
        EEC SSESGWT Y+ SP+    D   D D  Y    +++      H++    DSDDSMASDASSGP++Q  H
Subjt:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFH----ANHQD----DSDDSMASDASSGPSHQPDH

Q9LEZ1 Protein SUPPRESSOR OF PHYTOCHROME B 59.5e-0436.36Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSD--DSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKH--RAER
        MES+   G  E+C S ESGWTMY+      S   D D+D  YG +       ++DSD  DSM SDASSGP     +       +K  + + E++  + ++
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSD--DSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKH--RAER

Query:  KEVKEKLVLV
        K+  E++VLV
Subjt:  KEVKEKLVLV

Arabidopsis top hitse value%identityAlignment
AT1G26210.1 SOB five-like 19.7e-0432.37Show/hide
Query:  MESSQNVGVS--EECHSSESGWTMYIGSP----------VDDSSDG----DEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH
        MES +N G S  EE  S ESGWTMYI             VDD  D     + D+  E            ++SDDSMASDASSGPS+Q       H + K+
Subjt:  MESSQNVGVS--EECHSSESGWTMYIGSP----------VDDSSDG----DEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKH

Query:  --QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVR
          ++  ++K +   K +  +      K ++   ++S+V+
Subjt:  --QKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVR

AT1G68870.1 SOB five-like 21.5e-0430.46Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIG----------------------SPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPS-HQPDHPFG
        MES +  G +EE  S ESGWTMYI                         VDD  DGDED+D +   +     +  ++SDDSM SDASS PS HQP     
Subjt:  MESSQNVGVSEECHSSESGWTMYIG----------------------SPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPS-HQPDHPFG

Query:  GHGSMKHQKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGK
         H + K+       ++ E + V+++    G++ +  A++ +     + + K
Subjt:  GHGSMKHQKPLMEKHRAERKEVKEKLVLVGQKPKSSAQSSSKVRKSIWMGK

AT3G30580.1 unknown protein3.9e-0535.94Show/hide
Query:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYG----KNRVFHANHQD---DSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPL---------MEKHRA
        EEC SSESGWT YI S +++  +   D     G    K+R  +AN  +   DSDDSMASDASSGPS+   H     G  +    L         +  HR 
Subjt:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYG----KNRVFHANHQD---DSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPL---------MEKHRA

Query:  ERKEVKEKLVLVGQKPKSSAQSSSKVRK
        + K +   +    +K KS  +S S  +K
Subjt:  ERKEVKEKLVLVGQKPKSSAQSSSKVRK

AT5G08150.1 suppressor of phytochrome b 56.7e-0536.36Show/hide
Query:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSD--DSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKH--RAER
        MES+   G  E+C S ESGWTMY+      S   D D+D  YG +       ++DSD  DSM SDASSGP     +       +K  + + E++  + ++
Subjt:  MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSD--DSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKH--RAER

Query:  KEVKEKLVLV
        K+  E++VLV
Subjt:  KEVKEKLVLV

AT5G38790.1 unknown protein1.1e-0747.22Show/hide
Query:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFH----ANHQD----DSDDSMASDASSGPSHQPDH
        EEC SSESGWT Y+ SP+    D   D D  Y    +++      H++    DSDDSMASDASSGP++Q  H
Subjt:  EECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFH----ANHQD----DSDDSMASDASSGPSHQPDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGA
TAACGATGTAGAATATGGAAAGAATAGAGTTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATC
ACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATGGAGAAGCACAGAGCTGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCA
AAGAGTTCGGCCCAGAGTAGCTCAAAGGTAAGAAAGAGCATTTGGATGGGCAAAAGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGA
TAACGATGTAGAATATGGAAAGAATAGAGTTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATC
ACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATGGAGAAGCACAGAGCTGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCA
AAGAGTTCGGCCCAGAGTAGCTCAAAGGTAAGAAAGAGCATTTGGATGGGCAAAAGAAACTAG
Protein sequenceShow/hide protein sequence
MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNRVFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLMEKHRAERKEVKEKLVLVGQKP
KSSAQSSSKVRKSIWMGKRN