; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G002400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G002400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCYSTM domain-containing protein
Genome locationCmo_Chr11:1202411..1203170
RNA-Seq ExpressionCmoCh11G002400
SyntenyCmoCh11G002400
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]4.9e-1367.92Show/hide
Query:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        GPY V PP CDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]2.6e-1471.7Show/hide
Query:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        GPY VAPPMCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]5.0e-18100Show/hide
Query:  MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
Subjt:  MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-2794.03Show/hide
Query:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        MKQSLQNQTQ    GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
Subjt:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]1.5e-3390.12Show/hide
Query:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF
        MKQSLQNQTQ    GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETK Q V PPRETMSKGDGFCRGLCAG CCYCCLDICF
Subjt:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein1.3e-1471.7Show/hide
Query:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        GPY VAPPMCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

A0A2C9VWS0 CYSTM domain-containing protein1.5e-0749.37Show/hide
Query:  NQTQGPYP-------VAPPMCD-PMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF
        N++Q PYP       VAPP  + P+ +G S P     PP          PP +T SKGDGF RG CAGWCCYCCLD CF
Subjt:  NQTQGPYP-------VAPPMCD-PMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF

A0A2P5F4I3 Cysteine-rich transmembrane CYSTM domain containing protein2.3e-0856.25Show/hide
Query:  PYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF
        P S +   + ++ + N  PP+ET S+GDGF RG CAGWCCYCCLD+CF
Subjt:  PYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF

A0A5A7UV38 Uncharacterized protein2.4e-1367.92Show/hide
Query:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        GPY V PP CDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like7.1e-3490.12Show/hide
Query:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF
        MKQSLQNQTQ    GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETK Q V PPRETMSKGDGFCRGLCAG CCYCCLDICF
Subjt:  MKQSLQNQTQ----GPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22240.1 unknown protein8.9e-0548.15Show/hide
Query:  SQPYSSIIPPQGETKFQNVAPPR----ETMSKGDGFCRGLCAGWCCYCCLDICF
        S PY+S  P    T+   V  P     ET SKGDGF +G CA  CC C LD CF
Subjt:  SQPYSSIIPPQGETKFQNVAPPR----ETMSKGDGFCRGLCAGWCCYCCLDICF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAAGTTTACAGAACCAAACTCAAGGTCCTTACCCAGTTGCCCCACCTATGTGTGATCCAATGCAACACGGTCAGTCTCAGCCATACTCTTCAATTATACCTCC
TCAAGGGGAAACCAAGTTTCAAAATGTAGCTCCTCCAAGGGAAACCATGTCTAAAGGTGATGGGTTTTGCAGAGGACTTTGTGCAGGCTGGTGTTGCTACTGCTGCCTAG
ATATCTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
AAAGCATTCAACACCATGAAACAAAGTTTACAGAACCAAACTCAAGGTCCTTACCCAGTTGCCCCACCTATGTGTGATCCAATGCAACACGGTCAGTCTCAGCCATACTC
TTCAATTATACCTCCTCAAGGGGAAACCAAGTTTCAAAATGTAGCTCCTCCAAGGGAAACCATGTCTAAAGGTGATGGGTTTTGCAGAGGACTTTGTGCAGGCTGGTGTT
GCTACTGCTGCCTAGATATCTGCTTCTAGGGATGGAGGATCCTTGCAAATGCCACTTTGCGCCAGCACTTCTAGTTCGTCTGACACAAGTTATCTTCTGGGTTCCCATAA
GCATGTAGTACATTTCTCTGTAAACTACAGTTACCATTTGCTTCCAGGTTCTGTGTATGAAAATTTCCATGTCCCATGTTGTTATGTATAATATCCTATTTAATTTTCAA
GTAAGAGAGATGAA
Protein sequenceShow/hide protein sequence
MKQSLQNQTQGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLCAGWCCYCCLDICF