; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G002600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G002600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEthylene-responsive transcription factor
Genome locationCmo_Chr11:1283170..1283700
RNA-Seq ExpressionCmoCh11G002600
SyntenyCmoCh11G002600
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587637.1 Ethylene-responsive transcription factor ERN2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5993.08Show/hide
Query:  MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ
        MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ
Subjt:  MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ

Query:  HAIIKNRTRVRSSTAHDHQPSRNNNNNHNN
        HAIIKNRTRVRSSTAHDH        +HNN
Subjt:  HAIIKNRTRVRSSTAHDHQPSRNNNNNHNN

XP_016901366.1 PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo]5.3e-4758.29Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAA+AYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS
        PKL RL+QHA++KNR+R+ S+T H +   R +    + NNG IDSVVEDTIF CSSTN                        G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS

XP_023530977.1 ethylene-responsive transcription factor RAP2-2-like [Cucurbita pepo subsp. pepo]4.9e-8593.82Show/hide
Query:  MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ
        MAATHTSNSPVQQQ SHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDR EDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ
Subjt:  MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQ

Query:  HAIIKNRTRVRSSTAHDHQPSRNN--NNNHNNNNGFIDSVVEDTIFCCSSTNRLGSSKVYNSVFVAPSFSSRSDGESM
        HAIIKNR RVRSSTA DHQPSRNN  NNN++NNNGFIDSVVEDTIFCCSSTNR GSSKV+NSVFVAPSFSSRSD ESM
Subjt:  HAIIKNRTRVRSSTAHDHQPSRNN--NNNHNNNNGFIDSVVEDTIFCCSSTNRLGSSKVYNSVFVAPSFSSRSDGESM

XP_031737158.1 ethylene-responsive transcription factor ERN2 [Cucumis sativus]5.3e-4760.51Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAAMAYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHD-HQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN-----------------RLGSSKVYNSVFVAPSFSS
        PKL RL+QHA++KNR+R+ S+T H  H   R+     + NNG IDSVVEDTIF CSSTN                   G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHD-HQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN-----------------RLGSSKVYNSVFVAPSFSS

XP_038878811.1 ethylene-responsive transcription factor ERN1-like [Benincasa hispida]7.4e-4959.13Show/hide
Query:  MAATHTSN-----------SPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE---------
        MAAT +SN           +P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAAMAYDRAARLLRGR+AKTNFP +         
Subjt:  MAATHTSN-----------SPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE---------

Query:  ---QQQPSYSLFGHTPKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------RLGSSKVYNSV
            ++ S SLFGH+PKL RL+QHAI+KNR+R+RS+  +  Q +R        NNG IDSVVEDTIF CSSTN                  G SKVY SV
Subjt:  ---QQQPSYSLFGHTPKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------RLGSSKVYNSV

Query:  FVAPSFSS
        FVAPSFSS
Subjt:  FVAPSFSS

TrEMBL top hitse value%identityAlignment
A0A0A0LPP4 AP2/ERF domain-containing protein2.6e-4760.51Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAAMAYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHD-HQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN-----------------RLGSSKVYNSVFVAPSFSS
        PKL RL+QHA++KNR+R+ S+T H  H   R+     + NNG IDSVVEDTIF CSSTN                   G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHD-HQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN-----------------RLGSSKVYNSVFVAPSFSS

A0A1S4DZE7 ethylene-responsive transcription factor ERF087-like isoform X12.6e-4758.29Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAA+AYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS
        PKL RL+QHA++KNR+R+ S+T H +   R +    + NNG IDSVVEDTIF CSSTN                        G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS

A0A5A7USB5 Ethylene-responsive transcription factor ERF087-like isoform X12.6e-4758.29Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAA+AYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS
        PKL RL+QHA++KNR+R+ S+T H +   R +    + NNG IDSVVEDTIF CSSTN                        G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN----------------------RLGSSKVYNSVFVAPSFSS

A0A5D3CI83 Ethylene-responsive transcription factor ERF087-like isoform X17.5e-4757.14Show/hide
Query:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT
        AT++S+ P  Q+ +HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTF+RAEDAA+AYDRAARLLRGR+AKTNF  +           Q+ + SLF H+
Subjt:  ATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCE----------QQQPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN--------------------------RLGSSKVYNSVFVAPS
        PKL RL+QHA++KNR+R+ S+T H +   R +    + NNG IDSVVEDTIF CSSTN                            G SKVY SVFVAPS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTN--------------------------RLGSSKVYNSVFVAPS

Query:  FSS
        FSS
Subjt:  FSS

A0A6J1C2Y6 ethylene-responsive transcription factor 11-like7.5e-4761.98Show/hide
Query:  MAATHTSNSPVQQ---QSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQ-----QPSYSLFGHT
        MAAT +S S   Q      HGRRRFLGVRQRPSGRWVAEIKVSSQ LRLWLGTFDRAEDAAMAYDRAARLLRG  AKTNFP +         S ++FGH+
Subjt:  MAATHTSNSPVQQ---QSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQ-----QPSYSLFGHT

Query:  PKLHRLIQHAIIKNRTRVRSSTAHDH---QPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTNR------------LGSSKVYNSVFVAPSFSS
        PKL+RL+Q AI+KNR     STA DH   QPSR        + GF DSVVEDTIFC S+ N              G SKVY SVFVAPSFSS
Subjt:  PKLHRLIQHAIIKNRTRVRSSTAHDH---QPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTNR------------LGSSKVYNSVFVAPSFSS

SwissProt top hitse value%identityAlignment
A0A1X9PY88 Ethylene-responsive transcription factor ERN12.3e-1668.42Show/hide
Query:  RFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF
        +F+GVRQRPSGRWVAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG   +TNF
Subjt:  RFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF

A2Q5W1 Ethylene-responsive transcription factor ERN17.7e-1760.61Show/hide
Query:  QQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF
        + ++S+   +F+GVRQRPSGRWVAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG   +TNF
Subjt:  QQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF

A9Y0K8 Ethylene-responsive transcription factor ERN21.3e-1662.12Show/hide
Query:  QQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF
        + + S  R +F+GVRQRPSGR+VAEIK ++QN+R+WLGTF+ AE+AA AYD AA LLRG   +TNF
Subjt:  QQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF

A9Y0K9 Ethylene-responsive transcription factor ERN31.5e-1546.81Show/hide
Query:  RRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQHAIIKNRTRVRS
        R +F+GVRQR SG+W AEIK +S+N+R+WLGT+  AE+AA AYD AA LLRG   +TNF      P+ S    + KL  L+    I N ++ ++
Subjt:  RRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQHAIIKNRTRVRS

Q6J9S1 Ethylene-responsive transcription factor RAP2-117.7e-1755.56Show/hide
Query:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF
        T     +++S   + +F+GVRQRPSG+WVAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG   +TNF
Subjt:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein6.7e-1652.05Show/hide
Query:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFP
        +S+  +Q++S+  +R + GVRQRP G+W AEI+  ++  R+WLGTFD AE+AA+AYD+AA   RG  AK NFP
Subjt:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFP

AT2G33710.2 Integrase-type DNA-binding superfamily protein6.7e-1652.05Show/hide
Query:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFP
        +S+  +Q++S+  +R + GVRQRP G+W AEI+  ++  R+WLGTFD AE+AA+AYD+AA   RG  AK NFP
Subjt:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFP

AT4G39780.1 Integrase-type DNA-binding superfamily protein1.5e-1550.65Show/hide
Query:  PVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSY
        PV  ++   ++ + GVRQR  G+WVAEI++     RLWLGTFD AE+AAMAYD AA  LRG  A+ NFP  + +  Y
Subjt:  PVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSY

AT5G13910.1 Integrase-type DNA-binding superfamily protein2.3e-1651.81Show/hide
Query:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSL
        TS+   ++Q      RFLGVR+RP GR+ AEI+  +   R WLGTFD AE+AA+AYDRAAR +RG  A+TNF      PS S+
Subjt:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSL

AT5G19790.1 related to AP2 115.5e-1855.56Show/hide
Query:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF
        T     +++S   + +F+GVRQRPSG+WVAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG   +TNF
Subjt:  TSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACGCACACCTCCAATTCCCCTGTTCAACAACAGAGCAGCCATGGGAGAAGAAGGTTCTTGGGAGTCAGACAACGGCCTTCTGGAAGATGGGTGGCAGAGAT
CAAAGTGTCCTCACAGAACCTCAGGCTATGGCTTGGCACGTTCGATAGAGCCGAAGATGCAGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGAACCGCAA
AGACAAACTTCCCATGTGAACAACAACAACCTTCCTACTCCTTGTTTGGACACACCCCCAAGCTCCACCGTCTGATTCAACATGCCATCATCAAGAACAGAACCCGTGTG
AGATCATCAACGGCTCATGATCATCAGCCATCGAGAAATAATAATAATAATCATAATAATAATAATGGGTTTATTGATTCGGTTGTGGAAGATACTATTTTCTGTTGTTC
TAGTACGAATCGGTTAGGGAGCTCGAAAGTTTATAATTCTGTGTTTGTAGCTCCTTCTTTTAGCTCCAGAAGTGATGGGGAATCCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCACGCACACCTCCAATTCCCCTGTTCAACAACAGAGCAGCCATGGGAGAAGAAGGTTCTTGGGAGTCAGACAACGGCCTTCTGGAAGATGGGTGGCAGAGAT
CAAAGTGTCCTCACAGAACCTCAGGCTATGGCTTGGCACGTTCGATAGAGCCGAAGATGCAGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGAACCGCAA
AGACAAACTTCCCATGTGAACAACAACAACCTTCCTACTCCTTGTTTGGACACACCCCCAAGCTCCACCGTCTGATTCAACATGCCATCATCAAGAACAGAACCCGTGTG
AGATCATCAACGGCTCATGATCATCAGCCATCGAGAAATAATAATAATAATCATAATAATAATAATGGGTTTATTGATTCGGTTGTGGAAGATACTATTTTCTGTTGTTC
TAGTACGAATCGGTTAGGGAGCTCGAAAGTTTATAATTCTGTGTTTGTAGCTCCTTCTTTTAGCTCCAGAAGTGATGGGGAATCCATGTAA
Protein sequenceShow/hide protein sequence
MAATHTSNSPVQQQSSHGRRRFLGVRQRPSGRWVAEIKVSSQNLRLWLGTFDRAEDAAMAYDRAARLLRGRTAKTNFPCEQQQPSYSLFGHTPKLHRLIQHAIIKNRTRV
RSSTAHDHQPSRNNNNNHNNNNGFIDSVVEDTIFCCSSTNRLGSSKVYNSVFVAPSFSSRSDGESM