; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G002700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G002700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationCmo_Chr11:1319086..1323181
RNA-Seq ExpressionCmoCh11G002700
SyntenyCmoCh11G002700
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021603.1 hypothetical protein SDJN02_15329 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-2292.06Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKELGSAV
        MIGNSRKWAY+RIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKE+  +V
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKELGSAV
KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]9.2e-2088.14Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        M+G+SRKWAY+RIITGT+VGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKEQ+KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]9.2e-2088.14Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        M+G+SRKWAY+RIITGT+VGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKEQ+KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
XP_008453375.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]1.0e-1885Show/hide
Query:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        +M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KEL
Subjt:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]3.2e-2093.22Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        MIG+SRKWAYMRII GTIVGGVLGFYVMHRVEL YKEKMKERLKQYENELKKKEQ+KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941134.9e-1985Show/hide
Query:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        +M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KEL
Subjt:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 16.4e-1986.44Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
A0A6J1BYI4 uncharacterized protein LOC1110068981.4e-1884.75Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        M+GN RKWAY+RIITGTIVGGVLGFYVMHRVE+ YKEK+KERL+QYE ELKKKEQ+KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
A0A6J1E2A1 uncharacterized protein LOC1114301287.1e-1884.75Show/hide
Query:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        M+G+SR WAYMRII GTIVGGVLGFYVMHRVE+ YKEKMKERL+QYE ELKKKEQ+KEL
Subjt:  MIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
A0A6J1JJ44 uncharacterized protein LOC1114849057.1e-1883.33Show/hide
Query:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        +M+G+SR WAYMRII GTIVGGVLGFYVMHRVE+ YKEKMKERL+QYE ELKKKEQ+KEL
Subjt:  EMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein9.8e-1253.57Show/hide
Query:  NSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL
        +S  W Y RII GT++GG LGFYVMHR+E+SYK +M+E L QYE +++K+++ + L
Subjt:  NSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCAAGGCTGTTTTTAGCTCTTATTACCGAGTTCATGTGGGCATGTCCACTGCCCGCCGAATCTGGTCAATTCCTAGGAAAGCTGAGAGATCGGGAAATGATCGG
CAATTCTCGCAAATGGGCTTATATGCGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTGAGCTATAAGGAGAAAATGA
AAGAGAGGTTAAAACAATACGAAAACGAACTGAAGAAGAAGGAGCAAATTAAAGAGCTTGGAAGCGCTGTAATGATGAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
TCAGTCCACGATATGTAATCCATACTTCTTTCTGGGCTAAAAATAGTATTGGGCCACCGTCCAATTTTGTCGGCTGAAAAATTGGGCCTCTATTAACCTATACCCACAAC
GGAGGTTCCGCGCTTATTCGCGAATCATTTCTGCGTTAATTCTCCCTTAAAGTTGCTTGTTCTTCCACAGACGCAGCGTCGGCTATTGTCATCGATTTGGGCTCCCACAT
TTGCAAGCTGGTATTGCCGGAGAAGATGCCCCCAAGGCTGTTTTTAGCTCTTATTACCGAGTTCATGTGGGCATGTCCACTGCCCGCCGAATCTGGTCAATTCCTAGGAA
AGCTGAGAGATCGGGAAATGATCGGCAATTCTCGCAAATGGGCTTATATGCGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTT
GAACTGAGCTATAAGGAGAAAATGAAAGAGAGGTTAAAACAATACGAAAACGAACTGAAGAAGAAGGAGCAAATTAAAGAGCTTGGAAGCGCTGTAATGATGAAGGAATG
A
Protein sequenceShow/hide protein sequence
MPPRLFLALITEFMWACPLPAESGQFLGKLRDREMIGNSRKWAYMRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKELGSAVMMKE