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CmoCh11G003490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G003490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:1708288..1710469
RNA-Seq ExpressionCmoCh11G003490
SyntenyCmoCh11G003490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587717.1 hypothetical protein SDJN03_16282, partial [Cucurbita argyrosperma subsp. sororia]2.0e-51100Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNPPDHP
        MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNPPDHP
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNPPDHP

KAG6589671.1 hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1758.72Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT
        M  SHF+  FLLF  LFYLLSV    S P    S GRPARKYL +SFSNPE E+ +VK H+ E        ISSN  EYE SID   ELVYHIDY+G  T
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT

Query:  HPNP-PDHP
        HPNP P HP
Subjt:  HPNP-PDHP

KGN65505.1 hypothetical protein Csa_019778 [Cucumis sativus]1.1e-1759.41Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDH
        MR SHFI   LLFT  FYL S+D  HS P  F SEGR ARKYL TSFS+  HE    +   ++ SSNT EYE SI+   ELVYHIDY+G  THPNP P H
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDH

Query:  P
        P
Subjt:  P

XP_022921360.1 uncharacterized protein LOC111429652 [Cucurbita moschata]1.2e-1657.8Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT
        M  SHF+  FLLF  LFYLLSV    S P    S GRPARKYL +SFSNPE E+ +V+ H+ E        ISSN  EYE SID   ELVYHIDY+G  T
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT

Query:  HPNP-PDHP
        HPNP P HP
Subjt:  HPNP-PDHP

XP_023515382.1 uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]2.1e-1657.8Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT
        M  SHF+  FLLF  LFYLLSV    S P      GRPARKYL +SFSNPE E+ +V+ HK E        ISSN  EYE SID   ELVYHIDY+G  T
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT

Query:  HPNP-PDHP
        HPNP P HP
Subjt:  HPNP-PDHP

TrEMBL top hitse value%identityAlignment
A0A0A0LUD6 Uncharacterized protein5.3e-1859.41Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDH
        MR SHFI   LLFT  FYL S+D  HS P  F SEGR ARKYL TSFS+  HE    +   ++ SSNT EYE SI+   ELVYHIDY+G  THPNP P H
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDH

Query:  P
        P
Subjt:  P

A0A438GF17 Uncharacterized protein1.0e-0535.14Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKY---LDTSFSNPEHEYHRVKDHKQEISSNTH-------EYEKSIDGADELVYHIDYNGP
        M++SH +   +L TA +       F+ H    +    P R++   L  SFSNP+HEY +++D  +E+  +T        ++  S + ++E VYHIDY+G 
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKY---LDTSFSNPEHEYHRVKDHKQEISSNTH-------EYEKSIDGADELVYHIDYNGP

Query:  KTHPNP-PDHP
        KTHP P P HP
Subjt:  KTHPNP-PDHP

A0A5D3DYI5 Uncharacterized protein1.2e-1456.32Show/hide
Query:  VDPFHSHPQTFASEGRPARKYLDTSFSN-PEHEYHRVKDHK------QEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDHP
        +D  HS P+ F SEGRPARKYL TSFSN P+ EYH V + +      +++SSNT E+E SI+   EL+YHIDY+G  THPNP P HP
Subjt:  VDPFHSHPQTFASEGRPARKYLDTSFSN-PEHEYHRVKDHK------QEISSNTHEYEKSIDGADELVYHIDYNGPKTHPNP-PDHP

A0A6J1E5F1 uncharacterized protein LOC1114296525.9e-1757.8Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT
        M  SHF+  FLLF  LFYLLSV    S P    S GRPARKYL +SFSNPE E+ +V+ H+ E        ISSN  EYE SID   ELVYHIDY+G  T
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT

Query:  HPNP-PDHP
        HPNP P HP
Subjt:  HPNP-PDHP

A0A6J1JGL7 uncharacterized protein LOC1114849292.9e-1656.88Show/hide
Query:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT
        M  SHF+  FLLF  LFYLLSV    S P    S GRPARKYL + FSNPE E+ +V+ H+ E        ISSN  EYE SID   ELVYHIDY+G  T
Subjt:  MRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQE--------ISSNTHEYEKSIDGADELVYHIDYNGPKT

Query:  HPNP-PDHP
        HPNP P HP
Subjt:  HPNP-PDHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACATGGAATCTCCAGTGTAGCCATTGGTGATGATGTTAATCATGCAAGAATCAATCATGCTCAAAAGCTACAAAGTCAAGAAATGAGATACTCACATTTTATTCA
ATGTTTCCTGCTCTTTACTGCCCTCTTCTATCTTCTTTCTGTGGATCCCTTTCATTCTCATCCTCAGACTTTCGCCTCTGAAGGAAGACCTGCAAGGAAGTACCTTGATA
CATCATTTTCCAACCCAGAACATGAATATCACAGAGTCAAGGATCATAAACAAGAAATTTCCTCCAACACACATGAATATGAAAAAAGTATCGACGGTGCCGATGAACTT
GTCTACCATATTGACTATAATGGGCCGAAAACGCATCCGAATCCGCCCGATCATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACATGGAATCTCCAGTGTAGCCATTGGTGATGATGTTAATCATGCAAGAATCAATCATGCTCAAAAGCTACAAAGTCAAGAAATGAGATACTCACATTTTATTCA
ATGTTTCCTGCTCTTTACTGCCCTCTTCTATCTTCTTTCTGTGGATCCCTTTCATTCTCATCCTCAGACTTTCGCCTCTGAAGGAAGACCTGCAAGGAAGTACCTTGATA
CATCATTTTCCAACCCAGAACATGAATATCACAGAGTCAAGGATCATAAACAAGAAATTTCCTCCAACACACATGAATATGAAAAAAGTATCGACGGTGCCGATGAACTT
GTCTACCATATTGACTATAATGGGCCGAAAACGCATCCGAATCCGCCCGATCATCCATAGCCATAGGCTATGTATCAACTTTCAAGATGACATGAGCTACTTATACATGT
ACTGCACTACAG
Protein sequenceShow/hide protein sequence
MSHGISSVAIGDDVNHARINHAQKLQSQEMRYSHFIQCFLLFTALFYLLSVDPFHSHPQTFASEGRPARKYLDTSFSNPEHEYHRVKDHKQEISSNTHEYEKSIDGADEL
VYHIDYNGPKTHPNPPDHP