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CmoCh11G003500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G003500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBifunctional lysine-specific demethylase and histidyl-hydroxylase
Genome locationCmo_Chr11:1708371..1714511
RNA-Seq ExpressionCmoCh11G003500
SyntenyCmoCh11G003500
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587718.1 hypothetical protein SDJN03_16283, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4595.28Show/hide
Query:  LQLETIQIPIQLQCHHHSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCL
        L  ETIQIPIQLQCH+HSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRV LAACNAVMDLSTALFGRRRLVEVSPI CL
Subjt:  LQLETIQIPIQLQCHHHSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCL

Query:  MFSGFG
        MFSGFG
Subjt:  MFSGFG

KAG6589672.1 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1260Show/hide
Query:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMF
        L L  + I  E  GIASR        S++SL MNE+IAS D VVR LI+  A SKRRVALAACNAVMDLST  FGR  LVE S I  LMF
Subjt:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMF

KAG7021683.1 hypothetical protein SDJN02_15409, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4296.04Show/hide
Query:  LQLETIQIPIQLQCHHHSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCL
        L  ETIQIPIQLQCH+HSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI CL
Subjt:  LQLETIQIPIQLQCHHHSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCL

Query:  M
        M
Subjt:  M

XP_011657097.1 uncharacterized protein LOC101213606 [Cucumis sativus]8.3e-1256.04Show/hide
Query:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFS
        L L  + I  ER GIAS         S++SL MNE+IAS+D +VR LI+    SKRRVALAACNAV+DLST  FGR+RLVE S I  L+F+
Subjt:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFS

XP_022987328.1 uncharacterized protein LOC111484915 [Cucurbita maxima]2.8e-1262.35Show/hide
Query:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI
        L L  + I  ER GIASR        S++SL MNE+IAS D VVR LI+T A SKRRVALAACNAVMDLST  FGR  LVE S I
Subjt:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI

TrEMBL top hitse value%identityAlignment
A0A0A0LWZ8 Bifunctional lysine-specific demethylase and histidyl-hydroxylase2.6e-1157.65Show/hide
Query:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI
        L L  + I  ER GIAS         S++SL MNE+IAS+D +VR LI+    SKRRVALAACNAV+DLST  FGR+RLVE S I
Subjt:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI

A0A1S3BXA4 Bifunctional lysine-specific demethylase and histidyl-hydroxylase2.0e-1156.04Show/hide
Query:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFS
        L L  + I  ER GIAS         S++SL  NE+IA +D VVR LI+    SKRRVALAACNAV+DLST  FGR+RLVE S I  L+FS
Subjt:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFS

A0A5A7UQP6 Bifunctional lysine-specific demethylase and histidyl-hydroxylase1.3e-1053.76Show/hide
Query:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFSGF
        L L  + I  ER GIAS         S++SL  NE+IA +D VVR LI+    SKRRVALAACNAV+DLST  FGR+RLVE S I  L+ + F
Subjt:  LLLAAVSIPPERTGIAS--------RSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIGCLMFSGF

A0A6J1E073 Bifunctional lysine-specific demethylase and histidyl-hydroxylase5.2e-1261.18Show/hide
Query:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI
        L L  + I  ER GIASR        S++SL MNE+IAS D VVR LI+  A SKRRVALAACNAVMDLST  FGR  LVE S I
Subjt:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI

A0A6J1JJ52 Bifunctional lysine-specific demethylase and histidyl-hydroxylase1.4e-1262.35Show/hide
Query:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI
        L L  + I  ER GIASR        S++SL MNE+IAS D VVR LI+T A SKRRVALAACNAVMDLST  FGR  LVE S I
Subjt:  LLLAAVSIPPERTGIASR--------SIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGCTAAAAGAGCCAGCATGGAGGATGCAGTTGCAGTTAGAGACGATCCAAATCCCAATCCAACTTCAATGTCATCACCACTCTCTATCTCTTCTTCTCGCCGC
CGTTTCCATCCCTCCAGAGCGCACAGGCATCGCTTCTCGTTCGATCATATCGCTCTGTATGAATGAACTGATTGCTTCGAATGATGCGGTTGTGAGAGATTTGATCGCGA
CCTTTGCGTATTCGAAGAGAAGAGTTGCGTTGGCTGCTTGTAATGCTGTTATGGATTTGTCCACCGCGTTGTTTGGGCGGCGGAGGTTGGTAGAGGTCTCTCCCATTGGG
TGTCTTATGTTCTCTGGGTTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTGCTAAAAGAGCCAGCATGGAGGATGCAGTTGCAGTTAGAGACGATCCAAATCCCAATCCAACTTCAATGTCATCACCACTCTCTATCTCTTCTTCTCGCCGC
CGTTTCCATCCCTCCAGAGCGCACAGGCATCGCTTCTCGTTCGATCATATCGCTCTGTATGAATGAACTGATTGCTTCGAATGATGCGGTTGTGAGAGATTTGATCGCGA
CCTTTGCGTATTCGAAGAGAAGAGTTGCGTTGGCTGCTTGTAATGCTGTTATGGATTTGTCCACCGCGTTGTTTGGGCGGCGGAGGTTGGTAGAGGTCTCTCCCATTGGG
TGTCTTATGTTCTCTGGGTTTGGCTAGTCAATATGGTGATCATTGTGTGTTTGTATTGCCGTCAGATATTGTCCGTTTTGGTTCGTTCGCCGTCAGCCGATGTGGGATCT
ATCCACCTCCTTAGGGGCCGGCGTTAAAAGGTCTTCCTTCAGAGGCGAAAGTCTGAGGATGAGAATGAAAGGGATCCACAGAAAGAAGATAGAAGAGGGCAGTAAAGAGC
AGGAAACATTGAATAAAATGAGGTAGGCATTGTGGTGTGGTGTGGTGTGTATGCAATAAATATACGGAACTGAAAGAGGTGT
Protein sequenceShow/hide protein sequence
MLVLKEPAWRMQLQLETIQIPIQLQCHHHSLSLLLAAVSIPPERTGIASRSIISLCMNELIASNDAVVRDLIATFAYSKRRVALAACNAVMDLSTALFGRRRLVEVSPIG
CLMFSGFG