; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G003570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G003570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionnucleolar and coiled-body phosphoprotein 1 isoform X1
Genome locationCmo_Chr11:1749345..1752852
RNA-Seq ExpressionCmoCh11G003570
SyntenyCmoCh11G003570
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006594 - LIS1 homology motif
IPR007718 - Srp40, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587726.1 60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]3.1e-20799.75Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
        KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENA TLEENVVKSKKKKKKD
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD

Query:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
        GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Subjt:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT

Query:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV
        AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV
Subjt:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV

XP_022931348.1 nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata]2.7e-21199.75Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN

Query:  YSDED
        YSDED
Subjt:  YSDED

XP_022931357.1 nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata]1.1e-212100Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
        KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD

Query:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
        GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Subjt:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT

Query:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
        AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Subjt:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY

Query:  SDED
        SDED
Subjt:  SDED

XP_023530907.1 nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo]7.8e-20396.54Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEG DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKEN  T+EENVVKSKKKKKK
Subjt:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
        TAEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK GAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN

Query:  YSDED
        YSD+D
Subjt:  YSDED

XP_023530908.1 nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo]3.2e-20496.78Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
        KKCTQAIATPNKPDEETVKEG DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKEN  T+EENVVKSKKKKKKD
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD

Query:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
        GRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEKT
Subjt:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT

Query:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
        AEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK GAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Subjt:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY

Query:  SDED
        SD+D
Subjt:  SDED

TrEMBL top hitse value%identityAlignment
A0A6J1C0U0 nucleolar and coiled-body phosphoprotein 1 isoform X32.3e-14468.03Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        M++TLTTSVSPSLLA KPRQVLLS+    +    E P S  + VSL+PEQRTLLLHAV+ +L RNGFSK+LKKFRSEAQIEKD SKD  +SLEEMCH +L
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS-------------------VQEEARKKSKDKKKKKNKE
        KKC+QAI T NK  +ETVKE  DD  PEAQEEP KKSK+KK  K  V ETH D  E EKS+S                   V EEA KKSKDKKKKKNKE
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS-------------------VQEEARKKSKDKKKKKNKE

Query:  ---------------------------NAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCT
                                   NA+TLEE V KSK KKKKDG+ L DENSNQLMT   EGT+N++ GIKT HE+E+ND SKKRKRLASED DS T
Subjt:  ---------------------------NAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCT

Query:  VDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKL
        VD+  TED+KRRKLEGSKGCN+GVQSTKVN             TSNELSQQT E VEKTAE+TS+KKA+KKHSNGS EPKTINAFQRVKVDAVTF+DEKL
Subjt:  VDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKL

Query:  ADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
        ADNSYWAKGGAETGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Subjt:  ADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED

A0A6J1ETE6 nucleolar and coiled-body phosphoprotein 1 isoform X25.2e-213100Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
        KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD

Query:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
        GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Subjt:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT

Query:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
        AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Subjt:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY

Query:  SDED
        SDED
Subjt:  SDED

A0A6J1EYA7 nucleolar and coiled-body phosphoprotein 1 isoform X11.3e-21199.75Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKP-DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN

Query:  YSDED
        YSDED
Subjt:  YSDED

A0A6J1IB66 nucleolar and coiled-body phosphoprotein 1 isoform X21.7e-19594.06Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD
        KKCTQAIAT NK DEETVKEG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKNKEN  TLEENVVKSKKKKKKD
Subjt:  KKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKD

Query:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT
         RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEKT
Subjt:  GRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKT

Query:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
        +EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQE LGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Subjt:  AEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY

Query:  SDED
        SD+D
Subjt:  SDED

A0A6J1IDS9 nucleolar and coiled-body phosphoprotein 1 isoform X14.2e-19493.83Show/hide
Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNK-PDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK
        KKCTQAIAT NK  DEETVKEG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKNKEN  TLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNK-PDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        D RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
        T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQE LGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN

Query:  YSDED
        YSD+D
Subjt:  YSDED

SwissProt top hitse value%identityAlignment
E9Q5C9 Nucleolar and coiled-body phosphoprotein 14.0e-0829.58Show/hide
Query:  QAIATPNKPDEETVK---------EGFDDRAPEAQEEPTKKS----KDKKKIKKAVAETHVDIAENEKSD---SVQEEARKKSKDKKKKKNKENAVTLEE
        +A+ TP +P     K            ++ +   +EE +KKS    K K   K A A+     A +  SD   S  EE  K  K   KKK    AV+   
Subjt:  QAIATPNKPDEETVK---------EGFDDRAPEAQEEPTKKS----KDKKKIKKAVAETHVDIAENEKSD---SVQEEARKKSKDKKKKKNKENAVTLEE

Query:  NVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNE
           K++ K        S E+S++   +         I     +    +   K  K    E+      ++ ETE+  ++K  G+K    G +  +  T++E
Subjt:  NVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNE

Query:  LSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGV
         +    + V+     T  K+  KK    ++ P     F+RV+ + +   D ++ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG 
Subjt:  LSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGV

Query:  IDLQSHSVKFN
        I +Q +SVKF+
Subjt:  IDLQSHSVKFN

P41777 Nucleolar and coiled-body phosphoprotein 11.8e-0826.97Show/hide
Query:  QAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLL
        +A+ATP +P     K     +A  +  E    S +++  KK+V      +          ++A +   D     + E++ + EE     K   KK     
Subjt:  QAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLL

Query:  SDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQN---------ETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNE
        +      +    +E + + S    +  EE+   KSK   +  +   +     QN         E ED ++ K         G +     T++E +   ++
Subjt:  SDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQN---------ETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNE

Query:  YVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHS
         V+     T  K+  KK    ++ P     F+RV+ + +   D ++ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +S
Subjt:  YVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHS

Query:  VKFN
        VKF+
Subjt:  VKFN

Q14978 Nucleolar and coiled-body phosphoprotein 11.4e-0827.59Show/hide
Query:  RAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKS---KKKKKKDGRLLSDENSNQLMTRCSEGTL
        +A  +  E    S +++K KK VA T              ++A + S+D     +  ++   EE   KS   KK +K  G     + ++    +      
Subjt:  RAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKS---KKKKKKDGRLLSDENSNQLMTRCSEGTL

Query:  NESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQN-------ETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHS
        + S       EE+   K   R +    +  S    QN       E E+ +++K            +  V+ S  L ++      K AE   +KK   +  
Subjt:  NESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQN-------ETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHS

Query:  N-----GSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN
        N        E +  + F+RV+ + +   D ++ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +S+KF+
Subjt:  N-----GSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN

Arabidopsis top hitse value%identityAlignment
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink).2.5e-4240.11Show/hide
Query:  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKK
        K  +L+ EQ+ LLL +V+ +L R GFSK  KK  SEA+IEK   K+L+ SL ++  +  +         NK D E    G  +       E  KK K KK
Subjt:  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPDEETVKEGFDDRAPEAQEEPTKKSKDKK

Query:  KIKKAVAETHVDIAENEK---SDSVQEEARKKSKDKK--------KKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTP
        K K    ET V++ E EK   +D+V E+  K+ K KK        ++K KE    +E+ V + KKKK K   + +D++  ++                  
Subjt:  KIKKAVAETHVDIAENEK---SDSVQEEARKKSKDKK--------KKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTP

Query:  HEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVK
                SKKRKR   E+    T D +E E  +R+K E     ++GVQ T V    E   + N   EK+  K++++K+ K  SN S EPK    FQRV 
Subjt:  HEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVK

Query:  VDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED
        VD + +++     NSY++KGGAE GYG KAQEVLGQV+GRDFRHEKTKKKRGSYRGG+ID +SHS KFN SD++
Subjt:  VDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCC
CATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGT
TTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCA
AACAAACCAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGT
TGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTG
TTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACT
TTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCA
GAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGA
ATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAA
GTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGT
TAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAGG
ATTGA
mRNA sequenceShow/hide mRNA sequence
AAACCCTAGCGGGGAAGCAGCAGTCTTCTTCAATGCGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCT
TCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGT
CCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATG
TGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCAAACAAACCAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGA
GCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAA
AGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGTTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGT
GATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAG
GAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTAC
AGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAAT
GGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGC
AGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTA
TTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAGGATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAG
GGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGAAATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTG
GGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTAGGTCTCCAAATGCTCTGTAGTTTACATAATATATTTTTTCATAATATATTCATTACATAATATAAC
TTATTATTGTTCTA
Protein sequenceShow/hide protein sequence
MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATP
NKPDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGT
LNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVK
VDAVTFSDEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED