CuGenDBv2

Gene ID	CmoCh11G003780
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transmembrane protein
Genome location	Cmo_Chr11:1891803..1895399
RNA-Seq Expression	CmoCh11G003780
Synteny	CmoCh11G003780
Gene Ontology terms	GO:0036503 - ERAD pathway (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022930130.1 uncharacterized protein LOC111436643 isoform X1 [Cucurbita moschata]

7.2e-161

100

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
        RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

XP_022930137.1 uncharacterized protein LOC111436643 isoform X2 [Cucurbita moschata]

6.8e-159

99.67

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
         SHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

XP_023007004.1 uncharacterized protein LOC111499626 isoform X1 [Cucurbita maxima]

1.4e-151

96.08

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
        RSHSSNRTSSEGGTAAEENGR+ G QQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICASIVYLYQTGALTPLIR LS 
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
        GMQRAAAPPHPPRPGVQAENAPVA PAAGQEAAI  AAAAFAEGR GAEGENQ GNE NRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG

Query:  FHNHMD
        FHNHMD
Subjt:  FHNHMD

XP_023530470.1 uncharacterized protein LOC111793026 isoform X1 [Cucurbita pepo subsp. pepo]

7.8e-155

96.71

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLER QVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
        RSHSSNRTSSEGGTAAEENGRV GQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICASIVYLYQTGALTP IR LS 
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGV+AENAPVA PAAGQEAAIAA AFAEGRAGAEGENQ GNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

XP_023530471.1 uncharacterized protein LOC111793026 isoform X2 [Cucurbita pepo subsp. pepo]

7.3e-153

96.38

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLER QVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
         SHSSNRTSSEGGTAAEENGRV GQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICASIVYLYQTGALTP IR LS 
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGV+AENAPVA PAAGQEAAIAA AFAEGRAGAEGENQ GNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

TrEMBL top hits

e value

%identity

Alignment

A0A5D3DXX7 Uncharacterized protein

1.5e-132

85.34

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPE+IPSSSQ SSALKWQDDNLE+ QVPK SSFPT PNG VQMIPIMYPALVPGSA  +NQNRGAGIYAVP+FPSMGGP+IGM+TNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQ-VVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLS
        RS +SNRTS EGG+A EENGRV GQQQPQQQQPAPQRQ VVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICAS+VYLYQTGALTPLIR LS
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQ-VVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLS

Query:  LGMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAE--PGAANGGLNWWGVVKEIQMIVFGFITSLLP
         GMQRAAAPPHPPRPGV+AENAP+A PAA QE     AAFAEG+ GAE ENQ  NE NR  ENENVAE   GA NGGLNWWGVVKEIQMIVFGFITSLLP
Subjt:  LGMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAE--PGAANGGLNWWGVVKEIQMIVFGFITSLLP

Query:  GFHNHMD
        GFHNHMD
Subjt:  GFHNHMD

A0A6J1EPJ0 uncharacterized protein LOC111436643 isoform X2

3.3e-159

99.67

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
         SHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

A0A6J1EW49 uncharacterized protein LOC111436643 isoform X1

3.5e-161

100

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
        RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
        GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFH

Query:  NHMD
        NHMD
Subjt:  NHMD

A0A6J1L3R5 uncharacterized protein LOC111499626 isoform X1

6.6e-152

96.08

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
        RSHSSNRTSSEGGTAAEENGR+ G QQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICASIVYLYQTGALTPLIR LS 
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
        GMQRAAAPPHPPRPGVQAENAPVA PAAGQEAAI  AAAAFAEGR GAEGENQ GNE NRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG

Query:  FHNHMD
        FHNHMD
Subjt:  FHNHMD

A0A6J1L6J3 uncharacterized protein LOC111499626 isoform X2

6.2e-150

95.75

Show/hide

Query:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
        MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPT

Query:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL
         SHSSNRTSSEGGTAAEENGR+ G QQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIF+VHQDGSRQRLIVLVICASIVYLYQTGALTPLIR LS 
Subjt:  RSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSL

Query:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
        GMQRAAAPPHPPRPGVQAENAPVA PAAGQEAAI  AAAAFAEGR GAEGENQ GNE NRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG
Subjt:  GMQRAAAPPHPPRPGVQAENAPVAAPAAGQEAAI--AAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPG

Query:  FHNHMD
        FHNHMD
Subjt:  FHNHMD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G29960.1 unknown protein

6.7e-64

53.07

Show/hide

Query:  MAEGPEAIPSS--SQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPL---DNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLT
        M E PE + SS   QPS   K +D  ++       S F   PNG   M P+ YP LVPGS P+   +  NRGAGIYAVP     GG V G+ +N LIPLT
Subjt:  MAEGPEAIPSS--SQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPL---DNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLT

Query:  YSIPTRSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVV-RRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPL
        Y++PT      R ++E  T  E   + G  Q  QQQ PA QR VV RRFQIA Q+DL LILKLAAVIF+ +QDGSRQRL VLVI A+I+YLYQTGAL P 
Subjt:  YSIPTRSHSSNRTSSEGGTAAEENGRVGGQQQPQQQQPAPQRQVV-RRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPL

Query:  IRRLSLGMQRAAAPP-HPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEEN-RAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFI
        +R LS GM RAA PP  P RP V+A+N P AA    + A +          G E E   GN     A ENENV    A N G  WWG+VKEIQMIVFGFI
Subjt:  IRRLSLGMQRAAAPP-HPPRPGVQAENAPVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEEN-RAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFI

Query:  TSLLPGFHN
        TSLLPGFHN
Subjt:  TSLLPGFHN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGAAGGACCGGAAGCGATCCCTTCAAGCTCTCAACCCTCTTCTGCTCTGAAATGGCAGGATGACAATCTTGAACGCGCCCAGGTTCCCAAATTTTCCAGTTTCCC
CACTGTTCCAAATGGTGGTGTGCAAATGATTCCAATAATGTATCCTGCACTTGTTCCTGGATCAGCTCCTTTGGATAATCAAAATCGTGGAGCTGGTATTTATGCGGTTC
CTGCTTTTCCATCAATGGGAGGCCCAGTTATTGGAATGTCAACTAACAATCTTATTCCTTTGACTTACAGCATACCCACTAGATCTCATAGCAGTAATAGAACAAGTTCT
GAGGGTGGCACAGCAGCTGAGGAGAATGGGCGAGTAGGAGGACAACAACAGCCACAACAGCAGCAACCAGCACCTCAAAGACAAGTTGTTAGAAGATTTCAAATTGCAAT
ACAGATTGATTTATTGCTCATATTGAAGCTTGCTGCTGTAATTTTTATTGTTCATCAAGATGGTTCAAGACAAAGACTTATTGTTCTGGTGATTTGTGCTTCAATAGTCT
ATCTATATCAAACGGGAGCGCTTACACCATTGATACGACGGCTTTCACTAGGCATGCAAAGGGCAGCTGCACCTCCCCATCCCCCAAGACCAGGAGTTCAAGCAGAGAAC
GCTCCGGTTGCTGCTCCAGCTGCAGGGCAAGAGGCTGCGATTGCTGCTGCTGCTTTTGCAGAGGGACGAGCGGGGGCAGAGGGTGAGAACCAACTTGGAAATGAAGAGAA
CCGAGCTGTTGAAAATGAGAATGTAGCAGAGCCTGGTGCTGCAAATGGTGGTCTTAACTGGTGGGGAGTGGTGAAGGAAATCCAAATGATAGTCTTTGGCTTTATTACTT
CCCTTCTCCCAGGCTTCCATAATCACATGGACTAG

mRNA sequence

Show/hide mRNA sequence

GTTTAATTGTGAGATAATGATTTTCGATAGTTGAAGGGAAGAGAGTGTGCTAAAGAAGAAATTGGAATTTGATTTGATTTGATATACTTCCAAGTTCCTATGGCGGAAGG
ACCGGAAGCGATCCCTTCAAGCTCTCAACCCTCTTCTGCTCTGAAATGGCAGGATGACAATCTTGAACGCGCCCAGGTTCCCAAATTTTCCAGTTTCCCCACTGTTCCAA
ATGGTGGTGTGCAAATGATTCCAATAATGTATCCTGCACTTGTTCCTGGATCAGCTCCTTTGGATAATCAAAATCGTGGAGCTGGTATTTATGCGGTTCCTGCTTTTCCA
TCAATGGGAGGCCCAGTTATTGGAATGTCAACTAACAATCTTATTCCTTTGACTTACAGCATACCCACTAGATCTCATAGCAGTAATAGAACAAGTTCTGAGGGTGGCAC
AGCAGCTGAGGAGAATGGGCGAGTAGGAGGACAACAACAGCCACAACAGCAGCAACCAGCACCTCAAAGACAAGTTGTTAGAAGATTTCAAATTGCAATACAGATTGATT
TATTGCTCATATTGAAGCTTGCTGCTGTAATTTTTATTGTTCATCAAGATGGTTCAAGACAAAGACTTATTGTTCTGGTGATTTGTGCTTCAATAGTCTATCTATATCAA
ACGGGAGCGCTTACACCATTGATACGACGGCTTTCACTAGGCATGCAAAGGGCAGCTGCACCTCCCCATCCCCCAAGACCAGGAGTTCAAGCAGAGAACGCTCCGGTTGC
TGCTCCAGCTGCAGGGCAAGAGGCTGCGATTGCTGCTGCTGCTTTTGCAGAGGGACGAGCGGGGGCAGAGGGTGAGAACCAACTTGGAAATGAAGAGAACCGAGCTGTTG
AAAATGAGAATGTAGCAGAGCCTGGTGCTGCAAATGGTGGTCTTAACTGGTGGGGAGTGGTGAAGGAAATCCAAATGATAGTCTTTGGCTTTATTACTTCCCTTCTCCCA
GGCTTCCATAATCACATGGACTAGAACCTGTAAGCTCATGAACCTTTCTGAAGCTGGAAACGGTTTTTTCTTTTTCTATTTTTTTTTTCTTTAAACAAACAACTTAAAAG
GTTATGAAGCATGTTCGAGGGATCCCGTCTGTATAAACTGAAACAGCGGTGTTTAGTAGTGAGTTATGGGTTTAGCTTCTTCATGTTAAAGAGGACATCTCTGTATTTTC
CTTTCCTCCTTCCTGCAAGGTTTCTTTGTAATTGATTTTTTAAACGAGTCTGGACGGGATGCATCGTTAGTACATATCGAACACATATCGAACCACCGATTAATTTCTAA
TTTTCATTATATGAAATAAATATAACTAGTCTATAATGCACATGCAT

Protein sequence

Show/hide protein sequence

MAEGPEAIPSSSQPSSALKWQDDNLERAQVPKFSSFPTVPNGGVQMIPIMYPALVPGSAPLDNQNRGAGIYAVPAFPSMGGPVIGMSTNNLIPLTYSIPTRSHSSNRTSS
EGGTAAEENGRVGGQQQPQQQQPAPQRQVVRRFQIAIQIDLLLILKLAAVIFIVHQDGSRQRLIVLVICASIVYLYQTGALTPLIRRLSLGMQRAAAPPHPPRPGVQAEN
APVAAPAAGQEAAIAAAAFAEGRAGAEGENQLGNEENRAVENENVAEPGAANGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD

CmoCh11G003780 (gene) of Cucurbita moschata (Rifu) v1 genome