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CmoCh11G003790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G003790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationCmo_Chr11:1895930..1899046
RNA-Seq ExpressionCmoCh11G003790
SyntenyCmoCh11G003790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587745.1 hypothetical protein SDJN03_16310, partial [Cucurbita argyrosperma subsp. sororia]2.7e-6798.54Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDT ANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
XP_008453592.1 PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]1.3e-6191.24Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQPVFESPKKVIQPPPVQPPP QFDKSVS+  V NGNASV+GFFRNAVSKVQNAHS LDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGME GDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
XP_022930193.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata]1.1e-68100Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
XP_023530480.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo]1.8e-6697.81Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSV  V NGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
XP_038878417.1 uncharacterized protein LOC120070657 [Benincasa hispida]3.1e-6393.43Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSPAS PQPVFESPKKVIQPPPVQPPP QFDKSVSV    NGNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
TrEMBL top hitse value%identityAlignment
A0A0A0LUN3 Uncharacterized protein1.4e-6190.51Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQP+FESPKKVIQPPPVQPPP QFDKSVS+  V NGNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGME GDMKAKEP SKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
A0A1S3BXF0 uncharacterized protein LOC1034942566.4e-6291.24Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQPVFESPKKVIQPPPVQPPP QFDKSVS+  V NGNASV+GFFRNAVSKVQNAHS LDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGME GDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
A0A6J1E0H4 branchpoint-bridging protein-like5.6e-5888.32Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSPAS P PVFESPKKVIQPPPVQPPPQQ+DKS     V NGNASVAGFFRNAVSKVQNAHSSLDDHLARW 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKG+ENGD+KAKE  SKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
A0A6J1EQV9 myb-related transcription factor, partner of profilin-like5.4e-69100Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
A0A6J1KZL1 myb-related transcription factor, partner of profilin-like5.4e-69100Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Subjt:  GLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18910.1 hydroxyproline-rich glycoprotein family protein5.7e-3963.77Show/hide
Query:  MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARW
        MPIN + STPPP+IGKIGPYTVFMTPP+TP P   P  V + P   +  PPV PPPQQF    S D     + SV GFF+NAV+KVQNAHSS+DDHL RW
Subjt:  MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARW

Query:  FGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
        FGLNQSKYQWALD+YYESK  +   +KAKE   K QSV
Subjt:  FGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGCCCGCCTCTCCGCCGCAGCC
GGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGTGGCTAATGGGAATGCCTCCG
TCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCG
CTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAGACACCCTCTCAAAAATTAAAGCTAAGGTAAAGCAAAATTCCCACTCCCAATTTTCTCTGCAACTCCTTAAAGCTTCTTCTTCTTTCTTCAAAATCTTCGCCCTCAAG
ATCTCCCTTTCTCTTCTTTTTTCCAATCACAACAATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGC
CGTCCACTCCTTCGCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTT
TCTGTTGATACTGTGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCTCGCTG
GTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGA
GCGTGTAACAGGAACTCCTCATCTTTGGACAGTATAGAAACTATTTATACCTTATCTATGCAATGGCTGAACTGGATCTCATTGCTTATGAAACACTGATGAAGAGGTCG
GCCATTATACGAAAATCGACAGAATTCAGTCGTGTTGTAGTTGTTAACCCGTGTAATGTTATGTATTGTCGTCGTCGTCGTCGTCTTCTTTTTCCCGAGTTGATTCATCT
TTTGTTCTTTTGAAGCTGAACCTATGGCTTATGTATTTTGAGCTACCTTTTTTTGGTTATTTGTGGCATTGTAATGAAGGCAATGTTTGGCTACATCAATCCAAGGCAAT
GTTTGTCTAAATCAGTTGTTATAGTTTATAGAAATGATGAACATACATTGACTAAATTAAAATACGAGAAAATGACATTATTCTCA
Protein sequenceShow/hide protein sequence
MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQWA
LDDYYESKGMENGDMKAKEPSSKAQSV