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CmoCh11G004030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G004030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationCmo_Chr11:1990245..1991047
RNA-Seq ExpressionCmoCh11G004030
SyntenyCmoCh11G004030
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653160.1 hypothetical protein Csa_019870 [Cucumis sativus]8.0e-3086.52Show/hide
Query:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

KAG7021734.1 putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3694.38Show/hide
Query:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAGTVTAYYIQMI
        +ASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAGTVTAYY+ ++
Subjt:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAGTVTAYYIQMI

NP_001267702.1 probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cucumis sativus]8.0e-3086.52Show/hide
Query:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

XP_022987545.1 probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita maxima]8.9e-2984.44Show/hide
Query:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TLLL  L  SASLIALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

XP_038878721.1 probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida]5.2e-2985.39Show/hide
Query:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TL L LLFSA L+ALS+ANFNQD QITW DGRA ILNNGQLLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

TrEMBL top hitse value%identityAlignment
A0A5A7UVU6 Xyloglucan endotransglucosylase/hydrolase4.8e-2884.44Show/hide
Query:  MASKTLLL-LLFS-ASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS  + L LLFS ASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYYI
Subjt:  MASKTLLL-LLFS-ASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

A0A5D3CKM0 Xyloglucan endotransglucosylase/hydrolase4.8e-2884.44Show/hide
Query:  MASKTLLL-LLFS-ASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS  + L LLFS ASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYYI
Subjt:  MASKTLLL-LLFS-ASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

A0A6J1E169 Xyloglucan endotransglucosylase/hydrolase5.6e-2983.33Show/hide
Query:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TLLL  L  SASL+ALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

A0A6J1JH63 Xyloglucan endotransglucosylase/hydrolase4.3e-2984.44Show/hide
Query:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TLLL  L  SASLIALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

Q84JX3 Xyloglucan endotransglucosylase/hydrolase3.9e-3086.52Show/hide
Query:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI
        MAS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  MASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYI

SwissProt top hitse value%identityAlignment
P24806 Xyloglucan endotransglucosylase/hydrolase protein 243.8e-2265.88Show/hide
Query:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        TLL+  FS     +SAA+FN D+ + W +GR KILNNGQLLTLSLDK+SGSGFQS+ EYL GKIDMQ  LV GNSAGTVT +Y++
Subjt:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ

Q38857 Xyloglucan endotransglucosylase/hydrolase protein 223.2e-2160.67Show/hide
Query:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        MA   LL L  S  + +  +ANF +D++ITW DGR +I NNG+LLTLSLDK+SGSGFQS+NEYL GK+ MQ  LV GNSAGTVT  Y++
Subjt:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ

Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 231.4e-2467.06Show/hide
Query:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        T+++ L ++ +I   +ANF +D++ITW DGR +I NNG LLTLSLDKASGSGFQS+NEYL GKIDMQ  LVAGNSAGTVTAYY++
Subjt:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ

Q9FKL8 Putative xyloglucan endotransglucosylase/hydrolase protein 131.2e-2063.95Show/hide
Query:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYI
        +K  LLLL    LI+LSA +F  +  ITW +GRA I+ +GQLLT +LDK SGSGFQS+ EYL GKID  M+LVAGNSAGTVTAYY+
Subjt:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYI

Q9ZSU4 Xyloglucan endotransglucosylase/hydrolase protein 149.3e-2164.63Show/hide
Query:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYI
        LLL     ++A SA NF +   ITW +GRA I  NGQLLT +LDK SGSGFQS+ EYL GKIDM  +LVAGNSAGTVTAYY+
Subjt:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYI

Arabidopsis top hitse value%identityAlignment
AT4G25810.1 xyloglucan endotransglycosylase 69.8e-2667.06Show/hide
Query:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        T+++ L ++ +I   +ANF +D++ITW DGR +I NNG LLTLSLDKASGSGFQS+NEYL GKIDMQ  LVAGNSAGTVTAYY++
Subjt:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ

AT4G25820.1 xyloglucan endotransglucosylase/hydrolase 146.6e-2264.63Show/hide
Query:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYI
        LLL     ++A SA NF +   ITW +GRA I  NGQLLT +LDK SGSGFQS+ EYL GKIDM  +LVAGNSAGTVTAYY+
Subjt:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYI

AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 242.7e-2365.88Show/hide
Query:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        TLL+  FS     +SAA+FN D+ + W +GR KILNNGQLLTLSLDK+SGSGFQS+ EYL GKIDMQ  LV GNSAGTVT +Y++
Subjt:  TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ

AT5G57540.1 xyloglucan endotransglucosylase/hydrolase 138.6e-2263.95Show/hide
Query:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYI
        +K  LLLL    LI+LSA +F  +  ITW +GRA I+ +GQLLT +LDK SGSGFQS+ EYL GKID  M+LVAGNSAGTVTAYY+
Subjt:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYI

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein2.3e-2260.67Show/hide
Query:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ
        MA   LL L  S  + +  +ANF +D++ITW DGR +I NNG+LLTLSLDK+SGSGFQS+NEYL GK+ MQ  LV GNSAGTVT  Y++
Subjt:  MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAATTGCTCTCTCTGCAGCTAACTTCAACCAGGATATTCAAATCACTTGGAGAGATGGTCGAGCCAA
AATTCTCAACAACGGCCAACTTCTCACTCTGTCTCTCGACAAGGCCTCAGGCTCCGGATTCCAATCCCAGAACGAGTACTTGCTTGGAAAGATTGACATGCAACTTGTTG
CTGGCAATTCCGCTGGCACTGTCACTGCCTATTATATACAAATGATATCCTTTCGAATTGATCCAACCAGTCTCAAAGAGCAGGAGTTGTCACCTGAAGAATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAATTGCTCTCTCTGCAGCTAACTTCAACCAGGATATTCAAATCACTTGGAGAGATGGTCGAGCCAA
AATTCTCAACAACGGCCAACTTCTCACTCTGTCTCTCGACAAGGCCTCAGGCTCCGGATTCCAATCCCAGAACGAGTACTTGCTTGGAAAGATTGACATGCAACTTGTTG
CTGGCAATTCCGCTGGCACTGTCACTGCCTATTATATACAAATGATATCCTTTCGAATTGATCCAACCAGTCTCAAAGAGCAGGAGTTGTCACCTGAAGAATTCTGA
Protein sequenceShow/hide protein sequence
MASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAGTVTAYYIQMISFRIDPTSLKEQELSPEEF